/**
* Show the explorer page
*
* @param model
* @return the view name
*/
@RequestMapping(method = RequestMethod.GET)
public String init(
@RequestParam(value = "dataset", required = false) String selectedEntityName,
@RequestParam(value = "wizard", required = false) Boolean wizard,
Model model)
throws Exception {
// set entityExplorer URL for link to EntityExplorer for x/mrefs, but only if the user has
// permission to see the
// plugin
if (molgenisPermissionService.hasPermissionOnPlugin(
EntityExplorerController.ID, Permission.READ)
|| molgenisPermissionService.hasPermissionOnPlugin(
EntityExplorerController.ID, Permission.WRITE)) {
model.addAttribute("entityExplorerUrl", EntityExplorerController.ID);
}
Iterable<EntityMetaData> entitiesMeta =
Iterables.transform(
dataService.getEntityNames(),
new Function<String, EntityMetaData>() {
@Override
public EntityMetaData apply(String entityName) {
return dataService.getEntityMetaData(entityName);
}
});
model.addAttribute("entitiesMeta", entitiesMeta);
if (selectedEntityName == null) {
selectedEntityName = entitiesMeta.iterator().next().getName();
}
model.addAttribute("selectedEntityName", selectedEntityName);
model.addAttribute("wizard", (wizard != null) && wizard.booleanValue());
// Init genome browser
model.addAttribute("genomeBrowserSets", getGenomeBrowserSetsToModel());
String appHrefCss = molgenisSettings.getProperty(KEY_APP_HREF_CSS);
if (appHrefCss != null) model.addAttribute(KEY_APP_HREF_CSS.replaceAll("\\.", "_"), appHrefCss);
// including/excluding charts
Boolean appIncludeCharts =
molgenisSettings.getBooleanProperty(KEY_APP_INCLUDE_CHARTS, INCLUDE_CHARTS_MODULE);
model.addAttribute(MODEL_APP_INCLUDE_CHARTS, appIncludeCharts);
model.addAttribute(INITLOCATION, molgenisSettings.getProperty(INITLOCATION));
model.addAttribute(COORDSYSTEM, molgenisSettings.getProperty(COORDSYSTEM));
model.addAttribute(CHAINS, molgenisSettings.getProperty(CHAINS));
model.addAttribute(SOURCES, molgenisSettings.getProperty(SOURCES));
model.addAttribute(BROWSERLINKS, molgenisSettings.getProperty(BROWSERLINKS));
model.addAttribute(SEARCHENDPOINT, molgenisSettings.getProperty(SEARCHENDPOINT));
model.addAttribute(KARYOTYPEENDPOINT, molgenisSettings.getProperty(KARYOTYPEENDPOINT));
model.addAttribute(GENOMEBROWSERTABLE, molgenisSettings.getProperty(GENOMEBROWSERTABLE));
return "view-dataexplorer";
}
