Exemplo n.º 1
0
 private void addDihedralRes(String line, Section actualSection) {
   if (actualSection != null) {
     List<String> split = reworkLine(line);
     List<DihedralRestraint> diheRes = actualSection.getDihedralRestraints();
     DihedralRestraintImpl res = new DihedralRestraintImpl();
     if (split.size() == 7) {
       res.setAi(split.get(0));
       res.setAj(split.get(1));
       res.setAk(split.get(2));
       res.setAl(split.get(3));
       res.setFuncType(Integer.parseInt(split.get(4)));
       res.setC1(new BigDecimal(split.get(5)));
       res.setC2(new BigDecimal(split.get(6)));
       diheRes.add(res);
     } else if (split.size() == 10) {
       res.setAi(split.get(0));
       res.setAj(split.get(1));
       res.setAk(split.get(2));
       res.setAl(split.get(3));
       res.setFuncType(Integer.parseInt(split.get(4)));
       res.setLabel(split.get(5));
       res.setC1(new BigDecimal(split.get(6)));
       res.setC2(new BigDecimal(split.get(7)));
       res.setC3(new BigDecimal(split.get(8)));
       res.setC4(new BigDecimal(split.get(9)));
       diheRes.add(res);
     } else {
       ch.printErrorln(String.format("some dihedral restraints values are lost! --> %s", line));
     }
   }
 }