public static void mapPoint(
IntWritable clusterId,
WeightedVectorWritable point,
DistanceMeasure measure,
Map<Integer, List<VectorWritable>> representativePoints,
Map<Integer, WeightedVectorWritable> mostDistantPoints) {
int key = clusterId.get();
WeightedVectorWritable currentMDP = mostDistantPoints.get(key);
List<VectorWritable> repPoints = representativePoints.get(key);
double totalDistance = 0.0;
for (VectorWritable refPoint : repPoints) {
totalDistance += measure.distance(refPoint.get(), point.getVector());
}
if (currentMDP == null || currentMDP.getWeight() < totalDistance) {
mostDistantPoints.put(
key, new WeightedVectorWritable(totalDistance, point.getVector().clone()));
}
}
@Override
protected void reduce(IntWritable key, Iterable<WeightedVectorWritable> values, Context context)
throws IOException, InterruptedException {
// find the most distant point
WeightedVectorWritable mdp = null;
for (WeightedVectorWritable dpw : values) {
if (mdp == null || mdp.getWeight() < dpw.getWeight()) {
mdp = new WeightedVectorWritable(dpw.getWeight(), dpw.getVector());
}
}
context.write(new IntWritable(key.get()), new VectorWritable(mdp.getVector()));
}
@Override
public void map(IntWritable key, WeightedVectorWritable value, Context context)
throws IOException, InterruptedException {
String name = "";
Vector v = value.getVector();
if (v instanceof NamedVector) {
name = ((NamedVector) v).getName();
}
JSONObject object = new JSONObject();
try {
object.put("a", key.get());
object.put("fP", name);
context.write(NullWritable.get(), new Text(object.toString()));
} catch (JSONException e) {
LOG.error("Error while creating JSON record.", e);
}
}
public void printClusters(String[] dictionary)
throws IOException, InstantiationException, IllegalAccessException {
Configuration conf = new Configuration();
if (this.termDictionary != null) {
if ("text".equals(dictionaryFormat)) {
dictionary = VectorHelper.loadTermDictionary(new File(this.termDictionary));
} else if ("sequencefile".equals(dictionaryFormat)) {
FileSystem fs = FileSystem.get(new Path(this.termDictionary).toUri(), conf);
dictionary = VectorHelper.loadTermDictionary(conf, fs, this.termDictionary);
} else {
throw new IllegalArgumentException("Invalid dictionary format");
}
}
Writer writer =
this.outputFile == null
? new OutputStreamWriter(System.out)
: new FileWriter(this.outputFile);
try {
FileSystem fs = seqFileDir.getFileSystem(conf);
for (FileStatus seqFile : fs.globStatus(new Path(seqFileDir, "part-*"))) {
Path path = seqFile.getPath();
// System.out.println("Input Path: " + path); doesn't this interfere with output?
SequenceFile.Reader reader = new SequenceFile.Reader(fs, path, conf);
try {
Writable key = reader.getKeyClass().asSubclass(Writable.class).newInstance();
Writable value = reader.getValueClass().asSubclass(Writable.class).newInstance();
while (reader.next(key, value)) {
Cluster cluster = (Cluster) value;
String fmtStr = useJSON ? cluster.asJsonString() : cluster.asFormatString(dictionary);
if (subString > 0 && fmtStr.length() > subString) {
writer.write(':');
writer.write(fmtStr, 0, Math.min(subString, fmtStr.length()));
} else {
writer.write(fmtStr);
}
writer.write('\n');
if (dictionary != null) {
String topTerms = getTopFeatures(cluster.getCenter(), dictionary, numTopFeatures);
writer.write("\tTop Terms: ");
writer.write(topTerms);
writer.write('\n');
}
List<WeightedVectorWritable> points = clusterIdToPoints.get(cluster.getId());
if (points != null) {
writer.write("\tWeight: Point:\n\t");
for (Iterator<WeightedVectorWritable> iterator = points.iterator();
iterator.hasNext(); ) {
WeightedVectorWritable point = iterator.next();
writer.write(String.valueOf(point.getWeight()));
writer.write(": ");
writer.write(AbstractCluster.formatVector(point.getVector(), dictionary));
if (iterator.hasNext()) {
writer.write("\n\t");
}
}
writer.write('\n');
}
}
} finally {
reader.close();
}
}
} finally {
writer.close();
}
}