@Override
@SuppressWarnings({"unchecked", "deprecation"})
public List<InputSplit> getSplits(JobContext jobContext) throws IOException {
Configuration conf = Hadoop.JobContext.getConfiguration.invoke(jobContext);
Job job = new Job(conf);
Format format = dataset.getDescriptor().getFormat();
if (setInputPaths(jobContext, job)) {
if (Formats.AVRO.equals(format)) {
AvroJob.setInputKeySchema(job, dataset.getDescriptor().getSchema());
AvroKeyInputFormat<E> delegate = new AvroKeyInputFormat<E>();
return delegate.getSplits(jobContext);
} else if (Formats.PARQUET.equals(format)) {
// TODO: use later version of parquet (with https://github.com/Parquet/parquet-mr/pull/282)
// so we can set the schema correctly
// AvroParquetInputFormat.setReadSchema(job, view.getDescriptor().getSchema());
AvroParquetInputFormat delegate = new AvroParquetInputFormat();
return delegate.getSplits(jobContext);
} else if (Formats.JSON.equals(format)) {
return new JSONInputFormat().getSplits(jobContext);
} else if (Formats.CSV.equals(format)) {
// this generates an unchecked cast exception?
return new CSVInputFormat().getSplits(jobContext);
} else if (Formats.INPUTFORMAT.equals(format)) {
return InputFormatUtil.newInputFormatInstance(dataset.getDescriptor())
.getSplits(jobContext);
} else {
throw new UnsupportedOperationException("Not a supported format: " + format);
}
} else {
return ImmutableList.of();
}
}
public int run(String[] args) throws Exception {
Path inputPath = new Path("weblog_entries.txt");
Path outputPath = new Path("output");
Schema schema = ReflectData.get().getSchema(WeblogRecord.class);
Configuration conf = getConf();
Job weblogJob = Job.getInstance(conf);
weblogJob.setJobName("Avro Writer");
weblogJob.setJarByClass(getClass());
weblogJob.setNumReduceTasks(0);
weblogJob.setMapperClass(WeblogMapper_Ex_5.class);
weblogJob.setMapOutputKeyClass(AvroWrapper.class);
weblogJob.setMapOutputValueClass(NullWritable.class);
weblogJob.setInputFormatClass(TextInputFormat.class);
AvroJob.setOutputKeySchema(weblogJob, schema);
FileInputFormat.setInputPaths(weblogJob, inputPath);
FileOutputFormat.setOutputPath(weblogJob, outputPath);
if (weblogJob.waitForCompletion(true)) {
return 0;
}
return 1;
}
private void initialiseInput(final Job job, final AddElementsFromHdfs operation)
throws IOException {
if (null == avroSchemaFilePath) {
throw new IllegalArgumentException("Avro schema file path has not been set");
}
final Schema schema = new Parser().parse(new File(avroSchemaFilePath));
AvroJob.setInputKeySchema(job, schema);
job.setInputFormatClass(AvroKeyInputFormat.class);
AvroKeyInputFormat.addInputPath(job, operation.getInputPath());
}
public int run(String[] args) throws Exception {
Configuration conf = new Configuration();
if (args.length != 2) {
System.err.printf(
"Usage: %s <comma separated paths> <output path>\n", this.getClass().getName());
return -1;
}
Job job = Job.getInstance();
job.setJobName("PasmJoin");
job.setJarByClass(PsamXY.class);
job.setMapOutputKeyClass(Text.class);
job.setMapOutputValueClass(AvroValue.class);
job.setOutputKeyClass(AvroKey.class);
job.setOutputValueClass(NullWritable.class);
job.setMapperClass(PsamXYMapper.class);
job.setReducerClass(PsamXYReducer.class);
job.setInputFormatClass(AvroKeyInputFormat.class);
job.setOutputFormatClass(AvroKeyOutputFormat.class);
FileInputFormat.setInputPaths(job, args[0]);
Path output = new Path(args[1]);
FileOutputFormat.setOutputPath(job, output);
FileSystem fs = FileSystem.get(conf);
fs.delete(output, true);
AvroJob.setOutputKeySchema(job, outputSchema);
AvroJob.setMapOutputValueSchema(job, outputSchema);
// DistributedCache.addCacheFile(new Path("BM_TERM_TYPE_DMT.avro").toUri(),
// job.getConfiguration());
job.setNumReduceTasks(1);
job.submit();
job.waitForCompletion(true);
return 0;
}
@Test
public void testKeyValueInput() throws ClassNotFoundException, IOException, InterruptedException {
// Create a test input file.
File inputFile = createInputFile();
// Configure the job input.
Job job = new Job();
FileInputFormat.setInputPaths(job, new Path(inputFile.getAbsolutePath()));
job.setInputFormatClass(CombineAvroKeyValueInputFormat.class);
AvroJob.setInputKeySchema(job, Schema.create(Schema.Type.INT));
AvroJob.setInputValueSchema(job, Schema.create(Schema.Type.STRING));
// Configure a mapper.
job.setMapperClass(IndexMapper.class);
job.setMapOutputKeyClass(Text.class);
job.setMapOutputValueClass(IntWritable.class);
// Configure a reducer.
job.setReducerClass(IndexReducer.class);
job.setOutputKeyClass(Text.class);
job.setOutputValueClass(AvroValue.class);
AvroJob.setOutputValueSchema(job, Schema.createArray(Schema.create(Schema.Type.INT)));
// Configure the output format.
job.setOutputFormatClass(AvroKeyValueOutputFormat.class);
Path outputPath = new Path(mTempDir.getRoot().getPath(), "out-index");
FileOutputFormat.setOutputPath(job, outputPath);
// Run the job.
assertTrue(job.waitForCompletion(true));
// Verify that the output Avro container file as the expected data.
File avroFile = new File(outputPath.toString(), "part-r-00000.avro");
DatumReader<GenericRecord> datumReader =
new SpecificDatumReader<GenericRecord>(
AvroKeyValue.getSchema(
Schema.create(Schema.Type.STRING),
Schema.createArray(Schema.create(Schema.Type.INT))));
DataFileReader<GenericRecord> avroFileReader =
new DataFileReader<GenericRecord>(avroFile, datumReader);
assertTrue(avroFileReader.hasNext());
AvroKeyValue<CharSequence, List<Integer>> appleRecord =
new AvroKeyValue<CharSequence, List<Integer>>(avroFileReader.next());
assertNotNull(appleRecord.get());
assertEquals("apple", appleRecord.getKey().toString());
List<Integer> appleDocs = appleRecord.getValue();
assertEquals(3, appleDocs.size());
assertTrue(appleDocs.contains(1));
assertTrue(appleDocs.contains(2));
assertTrue(appleDocs.contains(3));
assertTrue(avroFileReader.hasNext());
AvroKeyValue<CharSequence, List<Integer>> bananaRecord =
new AvroKeyValue<CharSequence, List<Integer>>(avroFileReader.next());
assertNotNull(bananaRecord.get());
assertEquals("banana", bananaRecord.getKey().toString());
List<Integer> bananaDocs = bananaRecord.getValue();
assertEquals(2, bananaDocs.size());
assertTrue(bananaDocs.contains(1));
assertTrue(bananaDocs.contains(2));
assertTrue(avroFileReader.hasNext());
AvroKeyValue<CharSequence, List<Integer>> carrotRecord =
new AvroKeyValue<CharSequence, List<Integer>>(avroFileReader.next());
assertEquals("carrot", carrotRecord.getKey().toString());
List<Integer> carrotDocs = carrotRecord.getValue();
assertEquals(1, carrotDocs.size());
assertTrue(carrotDocs.contains(1));
assertFalse(avroFileReader.hasNext());
avroFileReader.close();
}
