private static int readSeqLineP(
PushbackReader in,
int s,
int pos,
int maxPos,
char[][] data,
String[] identifiers,
FormattedInput fi,
int maxLabelLength,
int lineLength)
throws IOException {
if (pos == 0) {
identifiers[s] = fi.readLabel(in, maxLabelLength).toUpperCase();
}
if (s == 0) {
String thisLine = fi.readLine(in, false);
if (thisLine.length() > maxPos - pos) {
lineLength = maxPos - pos;
} else {
lineLength = thisLine.length();
}
for (int i = 0; i < lineLength; i++) {
data[0][pos + i] = thisLine.charAt(i);
if (data[0][pos + i] == '.') {
throw new IllegalArgumentException(
"Copy character (.) in first sequence not allowed (pos. " + (i + pos + 1) + ")");
}
}
} else {
for (int i = 0; i < lineLength; i++) {
data[s][pos + i] = (char) fi.readNextChar(in);
if (data[s][pos + i] == '.') {
data[s][pos + i] = data[0][pos + i];
}
}
fi.nextLine(in);
}
return lineLength;
}
