/**
* checks an atom line for "ANGSTROMS", possibly overriding the data's natural units, BOHR
* (similar to Gaussian CUBE files).
*
* @param isXLowToHigh
* @param isAngstroms
* @param strAtomCount
* @param atomLine
* @param bs
* @return isAngstroms
*/
protected static boolean checkAtomLine(
boolean isXLowToHigh, boolean isAngstroms, String strAtomCount, String atomLine, SB bs) {
if (atomLine.indexOf("ANGSTROMS") >= 0) isAngstroms = true;
int ac = (strAtomCount == null ? Integer.MAX_VALUE : javajs.util.PT.parseInt(strAtomCount));
switch (ac) {
case Integer.MIN_VALUE:
ac = 0;
atomLine = " " + atomLine.substring(atomLine.indexOf(" ") + 1);
break;
case Integer.MAX_VALUE:
ac = Integer.MIN_VALUE;
break;
default:
String s = "" + ac;
atomLine = atomLine.substring(atomLine.indexOf(s) + s.length());
}
if (isAngstroms) {
if (atomLine.indexOf("ANGSTROM") < 0) atomLine += " ANGSTROMS";
} else {
if (atomLine.indexOf("BOHR") < 0) atomLine += " BOHR";
}
atomLine =
(ac == Integer.MIN_VALUE ? "" : (isXLowToHigh ? "+" : "-") + Math.abs(ac))
+ atomLine
+ "\n";
bs.append(atomLine);
return isAngstroms;
}
private WebExport(JmolViewer vwr, HistoryFile hFile) {
super(new BorderLayout());
historyFile = hFile;
remoteAppletPath = historyFile.getProperty("webMakerAppletPath", "..");
localAppletPath = historyFile.getProperty("webMakerLocalAppletPath", "..");
pageAuthorName = historyFile.getProperty("webMakerPageAuthorName",
GT._("Jmol Web Page Maker"));
popInWidth=PT.parseInt(historyFile.getProperty("webMakerPopInWidth", "300"));
popInHeight=PT.parseInt(historyFile.getProperty("webMakerPopInHeight", "300"));
scriptButtonPercent = PT.parseInt(historyFile.getProperty(
"webMakerScriptButtonPercent", "60"));
//Define the tabbed pane
JTabbedPane mainTabs = new JTabbedPane();
//Create file chooser
JFileChooser fc = new JFileChooser();
webPanels = new WebPanel[2];
if (runStatus != STAND_ALONE) {
//Add tabs to the tabbed pane
JPanel introPanel = new JPanel();
String introFileName = "WebExportIntro";
URL url = GuiMap.getHtmlResource(this, introFileName);
if (url == null) {
System.err.println(GT.o(GT._("Couldn't find file: {0}"), introFileName+".html"));
}
JEditorPane intro = new JEditorPane();
if (url != null) {
try {
intro.setPage(url);
} catch (IOException e) {
System.err.println("Attempted to read a bad URL: " + url);
}
}
intro.setEditable(false);
JScrollPane introPane = new JScrollPane(intro);
introPane.setMaximumSize(new Dimension(450, 350));
introPane.setPreferredSize(new Dimension(400, 300));
introPanel.setLayout(new BorderLayout());
introPanel.add(introPane);
introPanel.setMaximumSize(new Dimension(450, 350));
introPanel.setPreferredSize(new Dimension(400, 300));
mainTabs.add(GT._("Introduction"), introPanel);
webPanels[0] = new PopInJmol(vwr, fc, webPanels, 0);
webPanels[1] = new ScriptButtons(vwr, fc, webPanels, 1);
int w = Integer.parseInt(historyFile.getProperty("webMakerInfoWidth",
"300"));
int h = Integer.parseInt(historyFile.getProperty("webMakerInfoHeight",
"350"));
mainTabs.addTab(GT._("Pop-In Jmol"), webPanels[0].getPanel(w, h));
mainTabs.addTab(GT._("ScriptButton Jmol"), webPanels[1].getPanel(w, h));
// Uncomment to activate the test panel
// Test TestCreator = new Test((Viewer)vwr);
// JComponent Test = TestCreator.Panel();
// Maintabs.addTab("Tests",Test);
}
showMoleculesAndOrbitals = (runStatus == STAND_ALONE || JmolViewer
.checkOption(vwr, "webMakerAllTabs"));
if (showMoleculesAndOrbitals) {
//mainTabs.addTab("Orbitals", (new Orbitals()).getPanel());
//mainTabs.addTab("Molecules", (new Molecules()).getPanel());
}
//The LogPanel should always be the last one
mainTabs.addTab(GT._("Log"), LogPanel.getPanel());
//Add the tabbed pane to this panel
add(mainTabs);
//Create the small log
add(LogPanel.getMiniPanel(), BorderLayout.SOUTH);
//Uncomment the following line to use scrolling tabs.
//tabbedPane.setTabLayoutPolicy(JTabbedPane.SCROLL_TAB_LAYOUT);
}