Exemplo n.º 1
0
    AlignmentIterator(Map<String, List<Row>> groupedAlignmentRows) {
      rows =
          new PriorityQueue(
              5,
              new Comparator<Row>() {

                public int compare(Row o1, Row o2) {
                  return o1.getNextStartPos() - o2.getNextStartPos();
                }
              });

      for (List<Row> alignmentRows : groupedAlignmentRows.values()) {
        for (Row r : alignmentRows) {
          r.resetIdx();
          rows.add(r);
        }
      }

      advance();
    }