Exemplo n.º 1
0
  private static Header parseHeader(Node parent) throws XmlParserException {
    Header header = new Header();

    NodeList nodes = parent.getChildNodes();
    for (int nodeid = 0; nodeid < nodes.getLength(); ++nodeid) {
      Node node = nodes.item(nodeid);
      if (node.getNodeType() != Node.ELEMENT_NODE) continue;

      Element element = (Element) node;
      try {
        if (element.getTagName().equals("nrpeaks"))
          header.setNrPeaks(Integer.parseInt(element.getTextContent()));
        else if (element.getTagName().equals("date")) header.setDate(element.getTextContent());
        else if (element.getTagName().equals("owner")) header.setOwner(element.getTextContent());
        else if (element.getTagName().equals("description"))
          header.setDescription(element.getTextContent());
        else if (element.getTagName().equals("sets")) header.addSetInfos(parseSets(element));
        else if (element.getTagName().equals("measurements"))
          header.addMeasurementInfos(parseMeasurements(element));
        else if (element.getTagName().equals("annotations")) {
          Vector<Annotation> annotations = parseAnnotations(element);
          if (annotations != null)
            for (Annotation annotation : annotations) header.addAnnotation(annotation);
        }
      } catch (Exception e) {
        throw new XmlParserException(
            "Invalid value in header (" + element.getTagName() + "): '" + e.getMessage() + "'.");
      }
    }

    return header;
  }
Exemplo n.º 2
0
  private synchronized void init() throws SQLException {
    if (isClosed) return;

    // do tables exists?
    Statement stmt = conn.createStatement();
    ResultSet rs = stmt.executeQuery(TABLE_NAMES_SELECT_STMT);

    ArrayList<String> missingTables = new ArrayList(TABLES.keySet());
    while (rs.next()) {
      String tableName = rs.getString("name");
      missingTables.remove(tableName);
    }

    for (String missingTable : missingTables) {
      try {
        Statement createStmt = conn.createStatement();
        // System.out.println("Adding table "+ missingTable);
        createStmt.executeUpdate(TABLES.get(missingTable));
        createStmt.close();

      } catch (Exception e) {
        System.err.println(e.getClass().getName() + ": " + e.getMessage());
      }
    }
  }
Exemplo n.º 3
0
  protected void flushSerialBuffer() throws RunnerException, SerialException {
    // Cleanup the serial buffer
    try {
      Serial serialPort = new Serial();
      byte[] readBuffer;
      while (serialPort.available() > 0) {
        readBuffer = serialPort.readBytes();
        try {
          Thread.sleep(100);
        } catch (InterruptedException e) {
        }
      }

      serialPort.setDTR(false);
      serialPort.setRTS(false);

      try {
        Thread.sleep(100);
      } catch (InterruptedException e) {
      }

      serialPort.setDTR(true);
      serialPort.setRTS(true);

      serialPort.dispose();
    } catch (SerialNotFoundException e) {
      throw e;
    } catch (Exception e) {
      e.printStackTrace();
      throw new RunnerException(e.getMessage());
    }
  }
Exemplo n.º 4
0
 private Hashtable<String, String> getJarManifestAttributes(String path) {
   Hashtable<String, String> h = new Hashtable<String, String>();
   JarInputStream jis = null;
   try {
     cp.appendln(Color.black, "Looking for " + path);
     InputStream is = getClass().getResourceAsStream(path);
     if (is == null) {
       if (!path.endsWith("/MIRC.jar")) {
         cp.appendln(Color.red, "...could not find it.");
       } else {
         cp.appendln(
             Color.black,
             "...could not find it. [OK, this is a " + programName + " installation]");
       }
       return null;
     }
     jis = new JarInputStream(is);
     Manifest manifest = jis.getManifest();
     h = getManifestAttributes(manifest);
   } catch (Exception ex) {
     ex.printStackTrace();
   }
   if (jis != null) {
     try {
       jis.close();
     } catch (Exception ignore) {
     }
   }
   return h;
 }
Exemplo n.º 5
0
 public static boolean download(
     URL url, String file, int prefix, int totalFilesize, IProgressUpdater updater) {
   File fFile = new File(new File(file).getParentFile().getPath());
   if (!fFile.exists()) fFile.mkdirs();
   boolean downloaded = true;
   BufferedInputStream in = null;
   FileOutputStream out = null;
   BufferedOutputStream bout = null;
   try {
     int count;
     int totalCount = 0;
     byte data[] = new byte[BUFFER];
     in = new BufferedInputStream(url.openStream());
     out = new FileOutputStream(file);
     bout = new BufferedOutputStream(out);
     while ((count = in.read(data, 0, BUFFER)) != -1) {
       bout.write(data, 0, count);
       totalCount += count;
       if (updater != null) updater.update(prefix + totalCount, totalFilesize);
     }
   } catch (Exception e) {
     e.printStackTrace();
     Utils.logger.log(Level.SEVERE, "Download error!");
     downloaded = false;
   } finally {
     try {
       close(in);
       close(bout);
       close(out);
     } catch (Exception e) {
       e.printStackTrace();
     }
   }
   return downloaded;
 }
 /**
  * main method
  *
  * <p>This uses the system properties:
  *
  * <ul>
  *   <li><code>rjava.path</code> : path of the rJava package
  *   <li><code>rjava.lib</code> : lib sub directory of the rJava package
  *   <li><code>main.class</code> : main class to "boot", assumes Main if not specified
  *   <li><code>rjava.class.path</code> : set of paths to populate the initiate the class path
  * </ul>
  *
  * <p>and boots the "main" method of the specified <code>main.class</code>, passing the args down
  * to the booted class
  *
  * <p>This makes sure R and rJava are known by the class loader
  */
 public static void main(String[] args) {
   String rJavaPath = System.getProperty("rjava.path");
   if (rJavaPath == null) {
     System.err.println("ERROR: rjava.path is not set");
     System.exit(2);
   }
   String rJavaLib = System.getProperty("rjava.lib");
   if (rJavaLib == null) { // it is not really used so far, just for rJava.so, so we can guess
     rJavaLib = rJavaPath + File.separator + "libs";
   }
   RJavaClassLoader cl = new RJavaClassLoader(u2w(rJavaPath), u2w(rJavaLib));
   String mainClass = System.getProperty("main.class");
   if (mainClass == null || mainClass.length() < 1) {
     System.err.println("WARNING: main.class not specified, assuming 'Main'");
     mainClass = "Main";
   }
   String classPath = System.getProperty("rjava.class.path");
   if (classPath != null) {
     StringTokenizer st = new StringTokenizer(classPath, File.pathSeparator);
     while (st.hasMoreTokens()) {
       String dirname = u2w(st.nextToken());
       cl.addClassPath(dirname);
     }
   }
   try {
     cl.bootClass(mainClass, "main", args);
   } catch (Exception ex) {
     System.err.println("ERROR: while running main method: " + ex);
     ex.printStackTrace();
   }
 }
Exemplo n.º 7
0
 public static JSONObject readJSONUrlFile(String url) {
   try {
     return readJSONUrlFile(new URL(url));
   } catch (Exception e) {
     e.printStackTrace();
     return null;
   }
 }
Exemplo n.º 8
0
 public synchronized void close() {
   if (isClosed) return;
   try {
     if (conn != null) conn.close();
     isClosed = true;
   } catch (Exception e) {
     e.printStackTrace();
   }
 }
Exemplo n.º 9
0
 public static JSONObject readJSONUrlFile(URL url) {
   try {
     JSONParser tmp = new JSONParser();
     Object o = tmp.parse(new InputStreamReader(url.openStream()));
     if (!(o instanceof JSONObject)) return null;
     else return (JSONObject) o;
   } catch (Exception e) {
     e.printStackTrace();
     return null;
   }
 }
Exemplo n.º 10
0
 public static JSONObject readJSONFile(String filename) {
   try {
     JSONParser tmp = new JSONParser();
     Object o = tmp.parse(new InputStreamReader(new FileInputStream(filename)));
     if (!(o instanceof JSONObject)) return null;
     else return (JSONObject) o;
   } catch (Exception e) {
     e.printStackTrace();
     return null;
   }
 }
Exemplo n.º 11
0
 /** setVol(float) adjusts overall volume. Checks for min/max limits to avoid crashes. */
 public void setVol(float newvol) {
   if (newvol > -40.0f && newvol < 6.020f) {
     try {
       volCtrl.setValue(newvol);
     } catch (Exception e) {
       PApplet.println(e.getMessage());
     }
   } else {
     PApplet.println(
         "Error - volume '" + newvol + "' is out of range. Must be between -40.0f and 6.020f!");
   }
 }
Exemplo n.º 12
0
 public void writeIdToVertexMap(String filePath) {
   try {
     BufferedWriter bw = new BufferedWriter(new FileWriter(new File(filePath)));
     for (Entry<Integer, String> entry : nodes.entrySet()) {
       bw.write(entry.getKey() + " " + entry.getValue() + "\n");
     }
     bw.close();
   } catch (Exception ex) {
     ex.printStackTrace();
     System.exit(-1);
   }
 }
Exemplo n.º 13
0
 /**
  * setPanning(float) takes a float from -1.0f to 1.0f to pan the overall audio output across the
  * stereo spectrum. The centre-point is 0.
  */
 public void setPanning(float panval) {
   if (panval > -1.0f && panval < 1.0f) {
     try {
       FloatControl panctrl =
           (FloatControl) player.output_line.getControl(FloatControl.Type.BALANCE);
       panctrl.setValue(panval);
       panning = panval;
     } catch (Exception e) {
       // TODO Auto-generated catch block
       e.printStackTrace();
     }
   }
 }
Exemplo n.º 14
0
 public static void close(Object o) {
   try {
     if (o == null) return;
     if (o instanceof InputStream) {
       ((InputStream) o).close();
     } else if (o instanceof OutputStream) {
       ((OutputStream) o).flush();
       ((OutputStream) o).close();
     }
   } catch (Exception e) {
     e.printStackTrace();
   }
 }
Exemplo n.º 15
0
 /**
  * Refresh the repository from the URL.
  *
  * @throws Exception
  */
 public boolean refresh() {
   exception = null;
   try {
     resources.clear();
     parseDocument(url);
     visited = null;
     return true;
   } catch (Exception e) {
     e.printStackTrace();
     exception = e;
   }
   return false;
 }
Exemplo n.º 16
0
 public static String loadStringFromFile(String filename) {
   String line = "";
   File file = new File(filename);
   if (!file.exists()) return line;
   try {
     BufferedReader reader = new BufferedReader(new FileReader(file));
     line = reader.readLine();
     reader.close();
   } catch (Exception e) {
     e.printStackTrace();
   }
   return line;
 }
Exemplo n.º 17
0
  public static void main(String[] args) {
    try {
      ZipFile zipFile = new ZipFile(testDirName + zipFileName);
      ZipEntry ze = zipFile.getEntry(zipEntryName);
      byte[] digest1 = getZipDigest(zipFile, ze, true);
      System.out.println("Digest1: " + Base64Util.encode(digest1));
      byte[] digest2 = getZipDigest(zipFile, ze, false);
      System.out.println("Digest2: " + Base64Util.encode(digest2));

    } catch (Exception ex) {
      System.out.println("Error: " + ex.toString());
      ex.printStackTrace(System.out);
    }
  }
Exemplo n.º 18
0
 // Take a tree of files starting in a directory in a zip file
 // and copy them to a disk directory, recreating the tree.
 private int unpackZipFile(
     File inZipFile, String directory, String parent, boolean suppressFirstPathElement) {
   int count = 0;
   if (!inZipFile.exists()) return count;
   parent = parent.trim();
   if (!parent.endsWith(File.separator)) parent += File.separator;
   if (!directory.endsWith(File.separator)) directory += File.separator;
   File outFile = null;
   try {
     ZipFile zipFile = new ZipFile(inZipFile);
     Enumeration zipEntries = zipFile.entries();
     while (zipEntries.hasMoreElements()) {
       ZipEntry entry = (ZipEntry) zipEntries.nextElement();
       String name = entry.getName().replace('/', File.separatorChar);
       if (name.startsWith(directory)) {
         if (suppressFirstPathElement) name = name.substring(directory.length());
         outFile = new File(parent + name);
         // Create the directory, just in case
         if (name.indexOf(File.separatorChar) >= 0) {
           String p = name.substring(0, name.lastIndexOf(File.separatorChar) + 1);
           File dirFile = new File(parent + p);
           dirFile.mkdirs();
         }
         if (!entry.isDirectory()) {
           System.out.println("Installing " + outFile);
           // Copy the file
           BufferedOutputStream out = new BufferedOutputStream(new FileOutputStream(outFile));
           BufferedInputStream in = new BufferedInputStream(zipFile.getInputStream(entry));
           int size = 1024;
           int n = 0;
           byte[] b = new byte[size];
           while ((n = in.read(b, 0, size)) != -1) out.write(b, 0, n);
           in.close();
           out.flush();
           out.close();
           // Count the file
           count++;
         }
       }
     }
     zipFile.close();
   } catch (Exception e) {
     System.err.println("...an error occured while installing " + outFile);
     e.printStackTrace();
     System.err.println("Error copying " + outFile.getName() + "\n" + e.getMessage());
     return -count;
   }
   System.out.println(count + " files were installed.");
   return count;
 }
Exemplo n.º 19
0
 /**
  * a Constructor, usually called in the setup() method in your sketch to initialize and start the
  * library.
  *
  * @example portaTest
  * @param p
  */
 public PortaMod(PApplet p) {
   this.p = p;
   IBXM.SetMC(this);
   try {
     noteArrived = p.getClass().getMethod("grabNewdata", new Class[] {PortaMod.class});
   } catch (Exception e) {
     PApplet.println(e.getMessage());
   }
   try {
     noteArrivedB = p.getClass().getMethod("grabNewdataB", new Class[] {PortaMod.class});
   } catch (Exception e) {
     PApplet.println(e.getMessage());
   }
 }
Exemplo n.º 20
0
 /**
  * We have a referral to another repository. Just create another parser and read it inline.
  *
  * @param parser
  */
 void referral(XmlPullParser parser) {
   // TODO handle depth!
   try {
     parser.require(XmlPullParser.START_TAG, null, "referral");
     // String depth = parser.getAttributeValue(null, "depth");
     String path = parser.getAttributeValue(null, "url");
     URL url = new URL(this.url, path);
     parseDocument(url);
     parser.next();
     parser.require(XmlPullParser.END_TAG, null, "referral");
   } catch (Exception e) {
     e.printStackTrace();
   }
 }
Exemplo n.º 21
0
 /**
  * getSeek() returns the current position of the song in milliseconds as an int.
  *
  * @return songSeek
  */
 public int getSeek() {
   if (playing) {
     try {
       songPosition = player.play_position / 48;
     } catch (Exception e) {
       // TODO Auto-generated catch block
       e.printStackTrace();
     }
     return (int) songPosition;
   } else {
     System.out.println("Couldn't get song position");
     return 0;
   }
 }
Exemplo n.º 22
0
  public boolean process(String[] args, BytecodeReader reader, JavaParser parser) {
    program.initBytecodeReader(reader);
    program.initJavaParser(parser);

    initOptions();
    processArgs(args);

    Collection files = program.options().files();

    if (program.options().hasOption("-version")) {
      printVersion();
      return false;
    }
    if (program.options().hasOption("-help") || files.isEmpty()) {
      printUsage();
      return false;
    }

    try {
      for (Iterator iter = files.iterator(); iter.hasNext(); ) {
        String name = (String) iter.next();
        if (!new File(name).exists())
          System.err.println("WARNING: file \"" + name + "\" does not exist");
        program.addSourceFile(name);
      }

      for (Iterator iter = program.compilationUnitIterator(); iter.hasNext(); ) {
        CompilationUnit unit = (CompilationUnit) iter.next();
        if (unit.fromSource()) {
          Collection errors = unit.parseErrors();
          Collection warnings = new LinkedList();
          // compute static semantic errors when there are no parse errors or
          // the recover from parse errors option is specified
          if (errors.isEmpty() || program.options().hasOption("-recover"))
            unit.errorCheck(errors, warnings);
          if (!errors.isEmpty()) {
            processErrors(errors, unit);
            return false;
          } else {
            if (!warnings.isEmpty()) processWarnings(warnings, unit);
            processNoErrors(unit);
          }
        }
      }
    } catch (Exception e) {
      System.err.println(e.getMessage());
      e.printStackTrace();
    }
    return true;
  }
Exemplo n.º 23
0
 private boolean startLauncher(File dir) {
   try {
     Runtime rt = Runtime.getRuntime();
     ArrayList<String> command = new ArrayList<String>();
     command.add("java");
     command.add("-jar");
     command.add("Launcher.jar");
     String[] cmdarray = command.toArray(new String[command.size()]);
     Process proc = rt.exec(cmdarray, null, dir);
     return true;
   } catch (Exception ex) {
     System.err.println("Unable to start the Launcher program.\n" + ex.getMessage());
     return false;
   }
 }
Exemplo n.º 24
0
 void displayCurrentpattern() {
   for (int thisrow = 0; thisrow < currentpatternrows[0].size(); thisrow++) {
     for (int channelcount = 0; channelcount < player.get_num_channels(); channelcount++) {
       try {
         CurrentPattern tempdata =
             (CurrentPattern)
                 currentpatternrows[channelcount].get(
                     thisrow); // channelcount works, thisrow is often out of bounds
       } catch (Exception e) {
         // TODO Auto-generated catch block
         e.printStackTrace();
       }
     }
   }
 }
    /**
     * Get an input stream for a resource contained in the jar file
     *
     * @param name file name of the resource within the jar file
     * @return an input stream representing the resouce if it exists or null
     */
    public InputStream getResourceAsStream(String name) {

      if (zfile == null || hasChanged()) {
        update();
      }
      try {
        if (zfile == null) return null;
        ZipEntry e = zfile.getEntry(name);
        if (e != null) return zfile.getInputStream(e);
      } catch (Exception e) {
        if (verbose)
          System.err.println("RJavaClassLoader$UnixJarFile: exception: " + e.getMessage());
      }
      return null;
    }
Exemplo n.º 26
0
  private void updateLinuxServiceInstaller() {
    try {
      File dir = new File(directory, "CTP");
      if (suppressFirstPathElement) dir = dir.getParentFile();
      Properties props = new Properties();
      String ctpHome = dir.getAbsolutePath();
      cp.appendln(Color.black, "...CTP_HOME: " + ctpHome);
      ctpHome = ctpHome.replaceAll("\\\\", "\\\\\\\\");
      props.put("CTP_HOME", ctpHome);
      File javaHome = new File(System.getProperty("java.home"));
      String javaBin = (new File(javaHome, "bin")).getAbsolutePath();
      cp.appendln(Color.black, "...JAVA_BIN: " + javaBin);
      javaBin = javaBin.replaceAll("\\\\", "\\\\\\\\");
      props.put("JAVA_BIN", javaBin);

      File linux = new File(dir, "linux");
      File install = new File(linux, "ctpService-ubuntu.sh");
      cp.appendln(Color.black, "Linux service installer:");
      cp.appendln(Color.black, "...file: " + install.getAbsolutePath());
      String bat = getFileText(install);
      bat = replace(bat, props); // do the substitutions
      bat = bat.replace("\r", "");
      setFileText(install, bat);

      // If this is an ISN installation, put the script in the correct place.
      String osName = System.getProperty("os.name").toLowerCase();
      if (programName.equals("ISN") && !osName.contains("windows")) {
        install = new File(linux, "ctpService-red.sh");
        cp.appendln(Color.black, "ISN service installer:");
        cp.appendln(Color.black, "...file: " + install.getAbsolutePath());
        bat = getFileText(install);
        bat = replace(bat, props); // do the substitutions
        bat = bat.replace("\r", "");
        File initDir = new File("/etc/init.d");
        File initFile = new File(initDir, "ctpService");
        if (initDir.exists()) {
          setOwnership(initDir, "edge", "edge");
          setFileText(initFile, bat);
          initFile.setReadable(true, false); // everybody can read //Java 1.6
          initFile.setWritable(true); // only the owner can write //Java 1.6
          initFile.setExecutable(true, false); // everybody can execute //Java 1.6
        }
      }
    } catch (Exception ex) {
      ex.printStackTrace();
      System.err.println("Unable to update the Linux service ctpService.sh file");
    }
  }
Exemplo n.º 27
0
  public static void loadAnimations() {
    System.out.println("Testing");
    int i = 0;
    try {
      GZIPInputStream gzipDataFile =
          new GZIPInputStream(new FileInputStream(getDir() + "frames.dat"));
      DataInputStream dataFile = new DataInputStream(gzipDataFile);
      GZIPInputStream gzipIndexFile =
          new GZIPInputStream(new FileInputStream(getDir() + "frames.idx"));
      DataInputStream indexFile = new DataInputStream(gzipIndexFile);
      int length = indexFile.readInt();
      for (i = 0; i < length; i++) {
        int id = indexFile.readInt();
        int invlength = indexFile.readInt();
        byte[] data = new byte[invlength];
        dataFile.readFully(data);
        allFrames[id] = data;
      }
      indexFile.close();
      dataFile.close();
    } catch (Exception e) {
      System.out.println("Error: " + i);
      e.printStackTrace();
    }

    try {
      GZIPInputStream gzipDataFile =
          new GZIPInputStream(new FileInputStream(getDir() + "skinlist.dat"));
      DataInputStream dataFile = new DataInputStream(gzipDataFile);
      GZIPInputStream gzipIndexFile =
          new GZIPInputStream(new FileInputStream(getDir() + "skinlist.idx"));
      DataInputStream indexFile = new DataInputStream(gzipIndexFile);
      int length = indexFile.readInt();
      for (i = 0; i < length; i++) {
        int id = indexFile.readInt();
        int invlength = indexFile.readInt();
        byte[] data = new byte[invlength];
        dataFile.readFully(data);
        allSkinlist[id] = data;
      }
      indexFile.close();
      dataFile.close();
    } catch (Exception e) {
      System.out.println("Error: " + i);
      e.printStackTrace();
    }
  }
Exemplo n.º 28
0
 /** Mute audio (playback continues) */
 public void mute() {
   if (!muted) {
     try {
       muteCtrl.setValue(true);
       muted = true;
     } catch (Exception e) {
       PApplet.println(e.getMessage());
     }
   } else {
     try {
       muteCtrl.setValue(false);
       muted = false;
     } catch (Exception e) {
       PApplet.println(e.getMessage());
     }
   }
 }
Exemplo n.º 29
0
 public static boolean saveStringToFile(String filename, String data) {
   BufferedWriter writer = null;
   try {
     writer = new BufferedWriter(new FileWriter(filename));
     writer.write(data);
     writer.close();
   } catch (Exception e) {
     e.printStackTrace();
     if (writer != null)
       try {
         writer.close();
       } catch (Exception ee) {
       }
     return false;
   }
   return true;
 }
Exemplo n.º 30
0
 public void doit(String archiveFilename) {
   f.clear();
   try {
     tar = new TarInputStream(new GZIPInputStream(new FileInputStream(archiveFilename)));
     while ((current = tar.getNextEntry()) != null) {
       System.err.println("ok:" + current.getName());
       long s = current.getSize();
       if (!current.isDirectory()) {
         // System.err.println(current.getFile());
         f.prepareForBulkInsert(tar, current.getName());
       }
     }
   } catch (Exception e) {
     e.printStackTrace();
   }
   f.flushFiles();
 }