private CollectionProtocol getExistingCollectionProtocol(String shortTitle)
throws ApplicationException {
CollectionProtocol cp = new CollectionProtocol();
cp.setShortTitle(shortTitle);
cp = caTissueAPIClient.searchById(CollectionProtocol.class, cp);
return cp;
}
private Participant copyFrom(Participant participant) {
final Participant p = ParticipantFactory.getInstance().createObject();
p.setId(participant.getId());
p.setActivityStatus(participant.getActivityStatus());
p.setBirthDate(participant.getBirthDate());
p.setEthnicity(participant.getEthnicity());
p.setFirstName(participant.getFirstName());
p.setLastName(participant.getLastName());
p.setGender(participant.getGender());
p.setMetaPhoneCode(participant.getMetaPhoneCode());
p.setSocialSecurityNumber(participant.getSocialSecurityNumber());
p.setVitalStatus(participant.getVitalStatus());
final Iterator<Race> iter = participant.getRaceCollection().iterator();
while (iter.hasNext()) {
final Race race = (Race) iter.next();
final Race r = RaceFactory.getInstance().createObject();
r.setParticipant(p);
r.setRaceName(race.getRaceName());
p.getRaceCollection().add(r);
}
final Iterator<CollectionProtocolRegistration> cprIter =
participant.getCollectionProtocolRegistrationCollection().iterator();
while (cprIter.hasNext()) {
final CollectionProtocolRegistration collectionProtocolRegistration =
(CollectionProtocolRegistration) cprIter.next();
final CollectionProtocol collectionProtocol =
collectionProtocolRegistration.getCollectionProtocol();
final CollectionProtocol cp = CollectionProtocolFactory.getInstance().createObject();
cp.setActivityStatus(collectionProtocol.getActivityStatus());
cp.setTitle(collectionProtocol.getTitle());
cp.setShortTitle(collectionProtocol.getShortTitle());
final CollectionProtocolRegistration cpr =
CollectionProtocolRegistrationFactory.getInstance().createObject();
cpr.setParticipant(p);
cpr.setConsentSignatureDate(collectionProtocolRegistration.getConsentSignatureDate());
cpr.setRegistrationDate(collectionProtocolRegistration.getRegistrationDate());
cpr.setProtocolParticipantIdentifier(
collectionProtocolRegistration.getProtocolParticipantIdentifier());
// setting empty consenttier status collection, as update flow will not update consent tier
cpr.setConsentTierResponseCollection(
(Collection<ConsentTierResponse>) new LinkedHashSet<ConsentTierResponse>());
cpr.setCollectionProtocol(cp);
p.getCollectionProtocolRegistrationCollection().add(cpr);
}
return p;
}