@SuppressWarnings("unchecked")
@Override
protected void createColumns(
DefaultCellTable<ArtifactReference> table, ListDataProvider<ArtifactReference> dataProvider) {
final TextColumn<ArtifactReference> nameColumn =
new TextColumn<ArtifactReference>() {
@Override
public String getValue(ArtifactReference reference) {
return reference.getName();
}
};
nameColumn.setSortable(true);
final TextColumn<ArtifactReference> urlColumn =
new TextColumn<ArtifactReference>() {
@Override
public String getValue(ArtifactReference reference) {
return reference.getUrl();
}
};
urlColumn.setSortable(true);
ColumnSortEvent.ListHandler<ArtifactReference> sortHandler =
new ColumnSortEvent.ListHandler<ArtifactReference>(dataProvider.getList());
sortHandler.setComparator(nameColumn, createColumnCommparator(nameColumn));
sortHandler.setComparator(urlColumn, createColumnCommparator(urlColumn));
table.addColumn(nameColumn, "Name");
table.addColumn(urlColumn, "URL");
table.addColumnSortHandler(sortHandler);
table.addColumnSortHandler(sortHandler);
table.getColumnSortList().push(urlColumn);
table.getColumnSortList().push(nameColumn);
}
@Override
protected void createColumns(
DefaultCellTable<Transformer> table, ListDataProvider<Transformer> dataProvider) {
TextColumn<Transformer> fromColumn =
new TextColumn<Transformer>() {
@Override
public String getValue(Transformer transform) {
return transform.getFrom();
}
};
fromColumn.setSortable(true);
TextColumn<Transformer> toColumn =
new TextColumn<Transformer>() {
@Override
public String getValue(Transformer transform) {
return transform.getTo();
}
};
toColumn.setSortable(true);
TextColumn<Transformer> typeColumn =
new TextColumn<Transformer>() {
@Override
public String getValue(Transformer transform) {
return transform.getType();
}
};
typeColumn.setSortable(true);
ColumnSortEvent.ListHandler<Transformer> sortHandler =
new ColumnSortEvent.ListHandler<Transformer>(dataProvider.getList());
sortHandler.setComparator(fromColumn, createColumnCommparator(fromColumn));
sortHandler.setComparator(toColumn, createColumnCommparator(toColumn));
sortHandler.setComparator(typeColumn, createColumnCommparator(typeColumn));
table.addColumn(fromColumn, "From");
table.addColumn(toColumn, "To");
table.addColumn(typeColumn, "Type");
table.addColumnSortHandler(sortHandler);
table.getColumnSortList().push(typeColumn);
table.getColumnSortList().push(toColumn);
table.getColumnSortList().push(fromColumn);
table.setWidth("100%", false);
table.setColumnWidth(fromColumn, 45, Style.Unit.PCT);
table.setColumnWidth(toColumn, 45, Style.Unit.PCT);
table.setColumnWidth(typeColumn, 10, Style.Unit.PCT);
}
private void createDataGrid() {
dataGrid = new DataGrid<InputItem>(1024 * 1024, ZicoDataGridResources.INSTANCE, KEY_PROVIDER);
selectionModel = new SingleSelectionModel<InputItem>(KEY_PROVIDER);
dataGrid.setSelectionModel(selectionModel);
recordStore = new ListDataProvider<InputItem>(KEY_PROVIDER);
recordStore.addDataDisplay(dataGrid);
sortHandler = new ColumnSortEvent.ListHandler<InputItem>(recordStore.getList());
Column<InputItem, InputItem> colId = new IdentityColumn<InputItem>(ID_CELL);
dataGrid.addColumn(colId, new ResizableHeader<InputItem>("#", dataGrid, colId));
dataGrid.setColumnWidth(colId, 35, Style.Unit.PX);
final EditTextCell cellName = new EditTextCell();
Column<InputItem, String> colName =
new Column<InputItem, String>(cellName) {
@Override
public String getValue(InputItem rec) {
return rec.getName();
}
};
colName.setFieldUpdater(
new FieldUpdater<InputItem, String>() {
@Override
public void update(int index, InputItem rec, String value) {
if (!value.equals(rec.getName())) {
markChange(rec);
rec.setName(value);
cellName.clearViewData(rec.getId());
}
}
});
dataGrid.addColumn(colName, new ResizableHeader<InputItem>("Name", dataGrid, colName));
dataGrid.setColumnWidth(colName, 128, Style.Unit.PX);
colName.setSortable(true);
sortHandler.setComparator(
colName,
new Comparator<InputItem>() {
@Override
public int compare(InputItem o1, InputItem o2) {
return o1.getName().compareTo(o2.getName());
}
});
// final SelectCell<String,Integer> cellActive = new SelectCell<String,Integer>(
// ZicoWidgets.<String,Integer>map("NO",0,"YES",1));
// Column<InputItem,Integer> colActive = new Column<InputItem, Integer>(cellActive) {
// @Override
// public Integer getValue(InputItem rec) {
// return rec.getActive();
// }
// };
// colActive.setFieldUpdater(new FieldUpdater<InputItem, Integer>() {
// @Override
// public void update(int index, InputItem rec, Integer value) {
// if (rec.getActive() != value) {
// markChange(rec);
// rec.setActive(value);
// cellActive.clearViewData(rec.getId());
// }
// }
// });
// dataGrid.addColumn(colActive, new ResizableHeader<InputItem>("Active", dataGrid,
// colActive));
// dataGrid.setColumnWidth(colActive, 128, Style.Unit.PX);
// final DatePickerCell cellTstart = new DatePickerCell(ClientUtil.TSTAMP_FORMAT0);
// Column<InputItem,Date> colTstart = new Column<InputItem, Date>(cellTstart) {
// @Override
// public Date getValue(InputItem rec) {
// return ClientUtil.unix2date(rec.getTstart());
// }
// };
// colTstart.setFieldUpdater(new FieldUpdater<InputItem, Date>() {
// @Override
// public void update(int index, InputItem rec, Date value) {
// long t = ClientUtil.date2unix(value);
// if (t != rec.getTstart()) {
// markChange(rec);
// rec.setTstart(t);
// cellTstart.clearViewData(rec.getId());
// }
// }
// });
// colTstart.setHorizontalAlignment(HasHorizontalAlignment.ALIGN_CENTER);
// dataGrid.addColumn(colTstart, new ResizableHeader<InputItem>("TStart", dataGrid,
// colTstart));
// dataGrid.setColumnWidth(colTstart, 100, Style.Unit.PX);
// final DatePickerCell cellTstop = new DatePickerCell(ClientUtil.TSTAMP_FORMAT0);
// Column<InputItem,Date> colTstop = new Column<InputItem, Date>(cellTstop) {
// @Override
// public Date getValue(InputItem rec) {
// return ClientUtil.unix2date(rec.getTstop());
// }
// };
// colTstop.setFieldUpdater(new FieldUpdater<InputItem, Date>() {
// @Override
// public void update(int index, InputItem rec, Date value) {
// long t = ClientUtil.date2unix(value);
// if (t != rec.getTstop()) {
// markChange(rec);
// rec.setTstop(t);
// cellTstop.clearViewData(rec.getId());
// }
// }
// });
// colTstop.setHorizontalAlignment(HasHorizontalAlignment.ALIGN_CENTER);
// dataGrid.addColumn(colTstop, new ResizableHeader<InputItem>("TStop", dataGrid,
// colTstop));
// dataGrid.setColumnWidth(colTstop, 100, Style.Unit.PX);
Column<InputItem, Integer> colInput =
new Column<InputItem, Integer>(cellInput) {
@Override
public Integer getValue(InputItem iitem) {
return iitem.getInputId();
}
};
colInput.setFieldUpdater(
new FieldUpdater<InputItem, Integer>() {
@Override
public void update(int index, InputItem rec, Integer value) {
if (rec.getInputId() != value) {
markChange(rec);
rec.setInputId(value);
cellInput.clearViewData(rec.getId());
}
}
});
dataGrid.addColumn(colInput, new ResizableHeader<InputItem>("Input", dataGrid, colInput));
dataGrid.setColumnWidth(colInput, 128, Style.Unit.PX);
Column<InputItem, Integer> colTxForm =
new Column<InputItem, Integer>(cellTxForm) {
@Override
public Integer getValue(InputItem rec) {
return rec.getTxFormid();
}
};
colTxForm.setFieldUpdater(
new FieldUpdater<InputItem, Integer>() {
@Override
public void update(int index, InputItem iitem, Integer value) {
if (iitem.getTxFormid() != value) {
markChange(iitem);
iitem.setTxFormid(value);
cellTxForm.clearViewData(iitem.getId());
}
}
});
dataGrid.addColumn(colTxForm, new ResizableHeader<InputItem>("TxForm", dataGrid, colTxForm));
dataGrid.setColumnWidth(colTxForm, 128, Style.Unit.PX);
final EditTextCell cellComment = new EditTextCell();
Column<InputItem, String> colComment =
new Column<InputItem, String>(cellComment) {
@Override
public String getValue(InputItem rec) {
return rec.getComment();
}
};
colComment.setFieldUpdater(
new FieldUpdater<InputItem, String>() {
@Override
public void update(int index, InputItem rec, String value) {
if (!value.equals(rec.getComment())) {
markChange(rec);
rec.setComment(value);
cellComment.clearViewData(rec.getId());
}
}
});
dataGrid.addColumn(colComment, new ResizableHeader<InputItem>("Comment", dataGrid, colComment));
colComment.setSortable(true);
sortHandler.setComparator(
colComment,
new Comparator<InputItem>() {
@Override
public int compare(InputItem o1, InputItem o2) {
return o1.getComment().compareTo(o2.getComment());
}
});
dataGrid.addCellPreviewHandler(
new CellPreviewEvent.Handler<InputItem>() {
@Override
public void onCellPreview(CellPreviewEvent<InputItem> event) {
NativeEvent nev = event.getNativeEvent();
String eventType = nev.getType();
if (BrowserEvents.CONTEXTMENU.equals(eventType)) {
selectionModel.setSelected(event.getValue(), true);
if (event.getValue() != null) {
contextMenu.setPopupPosition(
event.getNativeEvent().getClientX(), event.getNativeEvent().getClientY());
contextMenu.show();
}
}
}
});
dataGrid.setKeyboardSelectionPolicy(
HasKeyboardSelectionPolicy.KeyboardSelectionPolicy.DISABLED);
dataGrid.addDomHandler(
new DoubleClickHandler() {
@Override
public void onDoubleClick(DoubleClickEvent event) {
event.preventDefault();
}
},
DoubleClickEvent.getType());
dataGrid.addDomHandler(
new ContextMenuHandler() {
@Override
public void onContextMenu(ContextMenuEvent event) {
event.preventDefault();
}
},
ContextMenuEvent.getType());
}
public DataObjectBrowser() {
initWidget(uiBinder.createAndBindUi(this));
objectButton.addClickHandler(
new ClickHandler() {
@Override
public void onClick(ClickEvent event) {
selectCurrentObject(true);
}
});
dataObjectPropertiesProvider.setList(new ArrayList<ObjectProperty>());
// Init data objects table
dataObjectPropertiesTable.setEmptyTableWidget(
new Label(Constants.INSTANCE.objectBrowser_emptyTable()));
// Init property name column
final TextColumn<ObjectProperty> propertyNameColumn =
new TextColumn<ObjectProperty>() {
@Override
public void render(Cell.Context context, ObjectProperty object, SafeHtmlBuilder sb) {
SafeHtml startDiv =
new SafeHtml() {
@Override
public String asString() {
return "<div style=\"cursor: pointer;\">";
}
};
SafeHtml endDiv =
new SafeHtml() {
@Override
public String asString() {
return "</div>";
}
};
sb.append(startDiv);
super.render(context, object, sb);
sb.append(endDiv);
}
@Override
public String getValue(final ObjectProperty objectProperty) {
return objectProperty.getName();
}
};
propertyNameColumn.setSortable(true);
dataObjectPropertiesTable.addColumn(
propertyNameColumn, Constants.INSTANCE.objectBrowser_columnName());
// dataObjectPropertiesTable.setColumnWidth(propertyNameColumn, 100, Style.Unit.PX);
dataObjectPropertiesTable.setColumnWidth(propertyNameColumn, 30, Style.Unit.PCT);
ColumnSortEvent.ListHandler<ObjectProperty> propertyNameColHandler =
new ColumnSortEvent.ListHandler<ObjectProperty>(dataObjectPropertiesProvider.getList());
propertyNameColHandler.setComparator(propertyNameColumn, new ObjectPropertyComparator("name"));
dataObjectPropertiesTable.addColumnSortHandler(propertyNameColHandler);
// Init property Label column
final TextColumn<ObjectProperty> propertyLabelColumn =
new TextColumn<ObjectProperty>() {
@Override
public void render(Cell.Context context, ObjectProperty object, SafeHtmlBuilder sb) {
SafeHtml startDiv =
new SafeHtml() {
@Override
public String asString() {
return "<div style=\"cursor: pointer;\">";
}
};
SafeHtml endDiv =
new SafeHtml() {
@Override
public String asString() {
return "</div>";
}
};
sb.append(startDiv);
super.render(context, object, sb);
sb.append(endDiv);
}
@Override
public String getValue(final ObjectProperty objectProperty) {
return AnnotationValueHandler.getStringValue(
objectProperty,
MainDomainAnnotations.LABEL_ANNOTATION,
MainDomainAnnotations.VALUE_PARAM);
}
};
propertyLabelColumn.setSortable(true);
dataObjectPropertiesTable.addColumn(
propertyLabelColumn, Constants.INSTANCE.objectBrowser_columnLabel());
dataObjectPropertiesTable.setColumnWidth(propertyLabelColumn, 30, Style.Unit.PCT);
ColumnSortEvent.ListHandler<ObjectProperty> propertyLabelColHandler =
new ColumnSortEvent.ListHandler<ObjectProperty>(dataObjectPropertiesProvider.getList());
propertyNameColHandler.setComparator(
propertyLabelColumn, new ObjectPropertyComparator("label"));
dataObjectPropertiesTable.addColumnSortHandler(propertyLabelColHandler);
// Init property type browsing column
ClickableImageResourceCell typeImageCell = new ClickableImageResourceCell(true, 25);
// final TooltipCellDecorator<ImageResource> typeImageDecorator = new
// TooltipCellDecorator<ImageResource>( typeImageCell );
// typeImageDecorator.setText(
// Constants.INSTANCE.objectBrowser_action_goToDataObjectDefinition() );
final Column<ObjectProperty, ImageResource> typeImageColumn =
new Column<ObjectProperty, ImageResource>(typeImageCell) {
@Override
public ImageResource getValue(final ObjectProperty property) {
if (!property.isBaseType()
&& !getDataObject().getClassName().equals(property.getClassName())
&& !getDataModel().isExternal(property.getClassName())) {
return ImagesResources.INSTANCE.BrowseObject();
} else {
return null;
}
}
};
typeImageColumn.setFieldUpdater(
new FieldUpdater<ObjectProperty, ImageResource>() {
public void update(
final int index, final ObjectProperty property, final ImageResource value) {
onTypeCellSelection(property);
}
});
dataObjectPropertiesTable.addColumn(typeImageColumn);
// Init property type column
final TextColumn<ObjectProperty> propertyTypeColumn =
new TextColumn<ObjectProperty>() {
@Override
public void render(Cell.Context context, ObjectProperty object, SafeHtmlBuilder sb) {
SafeHtml startDiv =
new SafeHtml() {
@Override
public String asString() {
return "<div style=\"cursor: pointer;\">";
}
};
SafeHtml endDiv =
new SafeHtml() {
@Override
public String asString() {
return "</div>";
}
};
sb.append(startDiv);
super.render(context, object, sb);
sb.append(endDiv);
}
@Override
public String getValue(final ObjectProperty objectProperty) {
return propertyTypeDisplay(objectProperty);
}
};
propertyTypeColumn.setSortable(true);
dataObjectPropertiesTable.addColumn(
propertyTypeColumn, Constants.INSTANCE.objectBrowser_columnType());
dataObjectPropertiesTable.setColumnWidth(propertyTypeColumn, 40, Style.Unit.PCT);
// Init delete column
final Column<ObjectProperty, String> deletePropertyColumnImg =
new Column<ObjectProperty, String>(deleteCell) {
@Override
public String getValue(final ObjectProperty global) {
return "Remove";
}
};
deletePropertyColumnImg.setFieldUpdater(
new FieldUpdater<ObjectProperty, String>() {
public void update(final int index, final ObjectProperty property, final String value) {
if (!isReadonly()) {
checkAndDeleteDataObjectProperty(property, index);
}
}
});
dataObjectPropertiesTable.addColumn(deletePropertyColumnImg);
ColumnSortEvent.ListHandler<ObjectProperty> propertyTypeColHandler =
new ColumnSortEvent.ListHandler<ObjectProperty>(dataObjectPropertiesProvider.getList());
propertyTypeColHandler.setComparator(
propertyTypeColumn, new ObjectPropertyComparator("className"));
dataObjectPropertiesTable.addColumnSortHandler(propertyTypeColHandler);
dataObjectPropertiesTable.getColumnSortList().push(propertyNameColumn);
// Init the selection model
SingleSelectionModel<ObjectProperty> selectionModel =
new SingleSelectionModel<ObjectProperty>();
dataObjectPropertiesTable.setSelectionModel(selectionModel);
selectionModel.addSelectionChangeHandler(
new SelectionChangeEvent.Handler() {
@Override
public void onSelectionChange(SelectionChangeEvent event) {
ObjectProperty selectedProperty =
((SingleSelectionModel<ObjectProperty>)
dataObjectPropertiesTable.getSelectionModel())
.getSelectedObject();
notifyFieldSelected(selectedProperty);
}
});
dataObjectPropertiesTable.setKeyboardSelectionPolicy(
HasKeyboardSelectionPolicy.KeyboardSelectionPolicy.BOUND_TO_SELECTION);
dataObjectPropertiesTable.addCellPreviewHandler(
new CellPreviewEvent.Handler<ObjectProperty>() {
@Override
public void onCellPreview(CellPreviewEvent<ObjectProperty> event) {
if (showingObject && "click".equals(event.getNativeEvent().getType())) {
int selectedRow = dataObjectPropertiesTable.getKeyboardSelectedRow();
if (lastSelectedRow >= 0 && lastSelectedRow == selectedRow) {
ObjectProperty selectedProperty =
dataObjectPropertiesProvider.getList().get(selectedRow);
((SingleSelectionModel<ObjectProperty>)
dataObjectPropertiesTable.getSelectionModel())
.setSelected(selectedProperty, true);
}
showingObject = false;
}
}
});
dataObjectPropertiesProvider.addDataDisplay(dataObjectPropertiesTable);
dataObjectPropertiesProvider.refresh();
newPropertyButton.setIcon(IconType.PLUS);
setReadonly(true);
}
public Widget draw() {
// contentWidget.setSize("100%", "100%");
DockLayoutPanel ft = new DockLayoutPanel(Style.Unit.PX);
contentWidget.setWidget(ft);
final DataGrid gridTable = new DataGrid();
gridTable.setSize("100%", "100%");
final ArrayList<Attribute> vosList = new ArrayList<Attribute>();
final GetAttributesV2 getVos =
new GetAttributesV2(
new JsonCallbackEvents() {
public void onFinished(JavaScriptObject jso) {
vosList.addAll(
new TableSorter<Attribute>()
.sortByAttrNameTranslation(JsonUtils.<Attribute>jsoAsList(jso)));
gridTable.setRowData(vosList);
gridTable.redraw();
}
});
getVos.getUserAttributes(3411);
getVos.retrieveData();
gridTable.setSelectionModel(
new MultiSelectionModel<Attribute>(new GeneralKeyProvider<Attribute>()));
final SelectionModel<Attribute> selectionModel = gridTable.getSelectionModel();
gridTable.setKeyboardSelectionPolicy(
HasKeyboardSelectionPolicy.KeyboardSelectionPolicy.DISABLED);
Column<Attribute, Boolean> checkBoxColumn =
new Column<Attribute, Boolean>(new CheckboxCell(true, true)) {
@Override
public Boolean getValue(Attribute object) {
// Get the value from the selection model.
return selectionModel.isSelected(object);
}
};
checkBoxColumn.setFieldUpdater(
new FieldUpdater<Attribute, Boolean>() {
@Override
public void update(int i, Attribute Attribute, Boolean aBoolean) {
selectionModel.setSelected(Attribute, aBoolean);
}
});
// Checkbox column header
CheckboxCell cb = new CheckboxCell();
Header<Boolean> checkBoxHeader =
new Header<Boolean>(cb) {
public Boolean getValue() {
return false; // return true to see a checked checkbox.
}
};
checkBoxHeader.setUpdater(
new ValueUpdater<Boolean>() {
public void update(Boolean value) {
// sets selected to all, if value = true, unselect otherwise
for (Attribute obj : vosList) {
selectionModel.setSelected(obj, value);
}
}
});
gridTable.addColumn(checkBoxColumn, checkBoxHeader, checkBoxHeader);
gridTable.setColumnWidth(checkBoxColumn, 40.0, Style.Unit.PX);
TextColumn<Attribute> idColumn =
new TextColumn<Attribute>() {
@Override
public String getValue(Attribute object) {
return String.valueOf(object.getId());
}
};
if (JsonUtils.isExtendedInfoVisible()) {
gridTable.addColumn(idColumn, "Id", "Id");
gridTable.setColumnWidth(idColumn, "90px");
}
// Name column
Column<Attribute, Attribute> nameColumn = JsonUtils.addColumn(new PerunAttributeNameCell());
// Description column
Column<Attribute, Attribute> descriptionColumn =
JsonUtils.addColumn(new PerunAttributeDescriptionCell());
// Value column
Column<Attribute, Attribute> valueColumn =
JsonUtils.addColumn(
new PerunAttributeValueCell(),
new FieldUpdater<Attribute, Attribute>() {
public void update(int index, Attribute object, Attribute value) {
object = value;
selectionModel.setSelected(object, object.isAttributeValid());
}
});
ColumnSortEvent.ListHandler<Attribute> columnSortHandler =
new ColumnSortEvent.ListHandler<Attribute>(vosList);
gridTable.addColumnSortHandler(columnSortHandler);
// Sorting name column
nameColumn.setSortable(true);
columnSortHandler.setComparator(
nameColumn, new AttributeComparator<Attribute>(AttributeComparator.Column.TRANSLATED_NAME));
// Sorting description column
descriptionColumn.setSortable(true);
columnSortHandler.setComparator(
descriptionColumn,
new AttributeComparator<Attribute>(AttributeComparator.Column.TRANSLATED_DESCRIPTION));
// Add sorting
gridTable.addColumnSortHandler(columnSortHandler);
// updates the columns size
gridTable.setColumnWidth(nameColumn, 200.0, Style.Unit.PX);
gridTable.setColumnWidth(valueColumn, 420.0, Style.Unit.PX);
gridTable.addColumn(nameColumn, "Name");
gridTable.addColumn(valueColumn, "Value");
gridTable.addColumn(descriptionColumn, "Description");
TabMenu tabMenu = new TabMenu();
tabMenu.addWidget(
TabMenu.getPredefinedButton(
ButtonType.ADD,
"",
new ClickHandler() {
@Override
public void onClick(ClickEvent clickEvent) {
session.getTabManager().addTabToCurrentTab(new TestDataGridTabItem(), true);
}
}));
ft.addNorth(tabMenu, 50);
ft.add(gridTable);
return getWidget();
}
public OrganismPanel() {
initWidget(ourUiBinder.createAndBindUi(this));
loadingDialog = new LoadingDialog("Processing ...", null, false);
TextColumn<OrganismInfo> organismNameColumn =
new TextColumn<OrganismInfo>() {
@Override
public String getValue(OrganismInfo organism) {
return organism.getName();
}
};
Column<OrganismInfo, Number> annotationsNameColumn =
new Column<OrganismInfo, Number>(new NumberCell()) {
@Override
public Integer getValue(OrganismInfo object) {
return object.getNumFeatures();
}
};
Column<OrganismInfo, Number> sequenceColumn =
new Column<OrganismInfo, Number>(new NumberCell()) {
@Override
public Integer getValue(OrganismInfo object) {
return object.getNumSequences();
}
};
sequenceColumn.setSortable(true);
organismNameColumn.setSortable(true);
annotationsNameColumn.setSortable(true);
Annotator.eventBus.addHandler(
OrganismChangeEvent.TYPE,
new OrganismChangeEventHandler() {
@Override
public void onOrganismChanged(OrganismChangeEvent organismChangeEvent) {
organismInfoList.clear();
organismInfoList.addAll(MainPanel.getInstance().getOrganismInfoList());
}
});
dataGrid.setLoadingIndicator(new HTML("Calculating Annotations ... "));
dataGrid.addColumn(organismNameColumn, "Name");
dataGrid.addColumn(annotationsNameColumn, "Annotations");
dataGrid.addColumn(sequenceColumn, "Ref Sequences");
dataGrid.setEmptyTableWidget(
new Label("No organisms available. Add new organisms using the form field."));
singleSelectionModel.addSelectionChangeHandler(
new SelectionChangeEvent.Handler() {
@Override
public void onSelectionChange(SelectionChangeEvent event) {
if (!creatingNewOrganism) {
loadOrganismInfo();
changeButtonSelection();
} else {
creatingNewOrganism = false;
}
}
});
dataGrid.setSelectionModel(singleSelectionModel);
dataProvider.addDataDisplay(dataGrid);
dataGrid.addDomHandler(
new DoubleClickHandler() {
@Override
public void onDoubleClick(DoubleClickEvent event) {
if (singleSelectionModel.getSelectedObject() != null) {
String orgId = singleSelectionModel.getSelectedObject().getId();
if (!MainPanel.getInstance().getCurrentOrganism().getId().equals(orgId)) {
OrganismRestService.switchOrganismById(orgId);
}
}
}
},
DoubleClickEvent.getType());
List<OrganismInfo> trackInfoList = dataProvider.getList();
ColumnSortEvent.ListHandler<OrganismInfo> sortHandler =
new ColumnSortEvent.ListHandler<OrganismInfo>(trackInfoList);
dataGrid.addColumnSortHandler(sortHandler);
sortHandler.setComparator(
organismNameColumn,
new Comparator<OrganismInfo>() {
@Override
public int compare(OrganismInfo o1, OrganismInfo o2) {
return o1.getName().compareTo(o2.getName());
}
});
sortHandler.setComparator(
annotationsNameColumn,
new Comparator<OrganismInfo>() {
@Override
public int compare(OrganismInfo o1, OrganismInfo o2) {
return o1.getNumFeatures() - o2.getNumFeatures();
}
});
sortHandler.setComparator(
sequenceColumn,
new Comparator<OrganismInfo>() {
@Override
public int compare(OrganismInfo o1, OrganismInfo o2) {
return o1.getNumSequences() - o2.getNumSequences();
}
});
}
private void initializeTable() {
typeColumn =
new TextColumn<AnnotationInfo>() {
@Override
public String getValue(AnnotationInfo annotationInfo) {
String annotationTypeString = annotationInfo.getType();
if (annotationTypeString.equals("non_canonical_five_prime_splice_site")) {
annotationTypeString = "NC 5' splice";
} else if (annotationTypeString.equals("non_canonical_three_prime_splice_site")) {
annotationTypeString = "NC 3' splice";
}
return annotationTypeString;
}
};
typeColumn.setSortable(true);
startColumn =
new Column<AnnotationInfo, Number>(new NumberCell()) {
@Override
public Integer getValue(AnnotationInfo annotationInfo) {
return getDisplayMin(annotationInfo.getMin());
}
};
startColumn.setSortable(true);
stopColumn =
new Column<AnnotationInfo, Number>(new NumberCell()) {
@Override
public Integer getValue(AnnotationInfo annotationInfo) {
return annotationInfo.getMax();
}
};
stopColumn.setSortable(true);
lengthColumn =
new Column<AnnotationInfo, Number>(new NumberCell()) {
@Override
public Integer getValue(AnnotationInfo annotationInfo) {
return annotationInfo.getLength();
}
};
lengthColumn.setSortable(true);
dataGrid.addColumn(typeColumn, "Type");
dataGrid.addColumn(startColumn, "Start");
// dataGrid.addColumn(stopColumn, "Stop");
dataGrid.addColumn(lengthColumn, "Length");
ColumnSortEvent.ListHandler<AnnotationInfo> sortHandler =
new ColumnSortEvent.ListHandler<AnnotationInfo>(annotationInfoList);
dataGrid.addColumnSortHandler(sortHandler);
sortHandler.setComparator(
typeColumn,
new Comparator<AnnotationInfo>() {
@Override
public int compare(AnnotationInfo o1, AnnotationInfo o2) {
return o1.getType().compareTo(o2.getType());
}
});
sortHandler.setComparator(
startColumn,
new Comparator<AnnotationInfo>() {
@Override
public int compare(AnnotationInfo o1, AnnotationInfo o2) {
return o1.getMin() - o2.getMin();
}
});
sortHandler.setComparator(
stopColumn,
new Comparator<AnnotationInfo>() {
@Override
public int compare(AnnotationInfo o1, AnnotationInfo o2) {
return o1.getMax() - o2.getMax();
}
});
sortHandler.setComparator(
lengthColumn,
new Comparator<AnnotationInfo>() {
@Override
public int compare(AnnotationInfo o1, AnnotationInfo o2) {
return o1.getLength() - o2.getLength();
}
});
}