// MrBayes 从数据库中读入到页面中
static void setParametersToRequestMrBayes(String userName, HttpServletRequest request) {
MultipleAlignmentDefaultDAO madDAO = new MultipleAlignmentDefaultDAO();
MultipleAlignmentDefault mad = madDAO.findByUserAndType(userName, MRBAYESTYPE);
if (mad != null) {
String defaultSetting = mad.getDefaultSetting();
String[] parameters = defaultSetting.split(";");
for (int i = 0; i < parameters.length; i++) {
String[] paraValues = parameters[i].split("\\" + SEPERATEPARAMETERS);
for (int j = 1; j < paraValues.length; j++) {
if (paraValues[j] != null && !"".equals(paraValues[j])) {
String[] pValues = paraValues[j].split(SEPERATEPARAMETERANDVALUE);
if (pValues.length == 2) {
request.setAttribute(paraValues[0] + SEPERATEPARANAME + pValues[0], pValues[1]);
}
}
}
}
}
}
public static String getExeCommandStringFromRequest(HttpServletRequest request, int type) {
if (request != null) {
return getExeCommandStringFromRequest(request);
} else {
MultipleAlignmentDefaultDAO maDao = new MultipleAlignmentDefaultDAO();
MultipleAlignmentDefault maDefault =
maDao.findByUserAndType(
SecurityContextHolder.getContext().getAuthentication().getName(), type);
if (maDefault == null) {
return "";
}
System.out.println(maDefault.toString());
return maDefault.toString();
}
}