public void generateTestInference() {
   if (lda == null) {
     System.out.println("Should run lda estimation first.");
     System.exit(1);
     return;
   }
   if (testTopicDistribution == null) testTopicDistribution = new double[test.size()][];
   TopicInferencer infer = lda.getInferencer();
   int iterations = 800;
   int thinning = 5;
   int burnIn = 100;
   for (int ti = 0; ti < test.size(); ti++) {
     testTopicDistribution[ti] =
         infer.getSampledDistribution(test.get(ti), iterations, thinning, burnIn);
   }
 }
Exemplo n.º 2
0
  public void doInference() {

    try {

      ParallelTopicModel model = ParallelTopicModel.read(new File(inferencerFile));
      TopicInferencer inferencer = model.getInferencer();

      // TopicInferencer inferencer =
      //    TopicInferencer.read(new File(inferencerFile));

      // InstanceList testing = readFile();
      readFile();
      InstanceList testing = generateInstanceList(); // readFile();

      for (int i = 0; i < testing.size(); i++) {

        StringBuilder probabilities = new StringBuilder();
        double[] testProbabilities = inferencer.getSampledDistribution(testing.get(i), 10, 1, 5);

        ArrayList probabilityList = new ArrayList();

        for (int j = 0; j < testProbabilities.length; j++) {
          probabilityList.add(new Pair<Integer, Double>(j, testProbabilities[j]));
        }

        Collections.sort(probabilityList, new CustomComparator());

        for (int j = 0; j < testProbabilities.length && j < topN; j++) {
          if (j > 0) probabilities.append(" ");
          probabilities.append(
              ((Pair<Integer, Double>) probabilityList.get(j)).getFirst().toString()
                  + ","
                  + ((Pair<Integer, Double>) probabilityList.get(j)).getSecond().toString());
        }

        System.out.println(docIds.get(i) + "," + probabilities.toString());
      }

    } catch (Exception e) {
      e.printStackTrace();
      System.err.println(e.getMessage());
    }
  }
Exemplo n.º 3
0
  public void test() throws Exception {

    ParallelTopicModel model = ParallelTopicModel.read(new File(inferencerFile));
    TopicInferencer inferencer = model.getInferencer();

    ArrayList<Pipe> pipeList = new ArrayList<Pipe>();
    pipeList.add(new CharSequence2TokenSequence(Pattern.compile("\\p{L}\\p{L}+")));
    pipeList.add(new TokenSequence2FeatureSequence());

    InstanceList instances = new InstanceList(new SerialPipes(pipeList));
    Reader fileReader = new InputStreamReader(new FileInputStream(new File(fileName)), "UTF-8");
    instances.addThruPipe(
        new CsvIterator(
            fileReader,
            Pattern.compile("^(\\S*)[\\s,]*(\\S*)[\\s,]*(.*)$"),
            3,
            2,
            1)); // data, label, name fields
    double[] testProbabilities = inferencer.getSampledDistribution(instances.get(1), 10, 1, 5);
    for (int i = 0; i < 1000; i++) System.out.println(i + ": " + testProbabilities[i]);
  }