/**
* Determines is the supplied gene descriptor is statistically significant in any of the agi query
* list columns.
*
* @param geneDescriptor
* @return
*/
public boolean isSignificant(GeneDescriptor geneDescriptor) {
for (String setName : getSetNames()) {
ProbabilityResult pr = getProbabilityResult(setName, geneDescriptor);
if (pr != null && Math.log10(pr.getProbability()) <= -3) {
return true;
}
}
return false;
}
/**
* Adds a new map entry with the supplied query list name and probability result for a particular
* gene descriptor. The table key is the combined query list name and gene descriptor from the
* probability result.
*
* @param name the query list name.
* @param pr the probability result.
*/
public void add(String name, ProbabilityResult pr) {
map.put(new SummaryKey(name, pr.getGeneDescriptor()), pr);
nameSet.add(name);
geneDescriptorSet.add(pr.getGeneDescriptor());
}