@Test
public void testParsingDispositions() throws Exception {
Concept admit =
new ConceptBuilder(
null,
conceptService.getConceptDatatypeByName("N/A"),
conceptService.getConceptClassByName("Misc"))
.addName("Admit")
.get();
when(emrConceptService.getConcept("test:admit")).thenReturn(admit);
Obs dispositionObs =
dispositionDescriptor.buildObsGroup(
new Disposition(
"emrapi.admit",
"Admit",
"test:admit",
Collections.<String>emptyList(),
Collections.<DispositionObs>emptyList()),
emrConceptService);
encounter.addObs(doNotGoToServiceToFormatMembers(dispositionObs));
ParsedObs parsed = parser.parseObservations(Locale.ENGLISH);
assertThat(parsed.getDiagnoses().size(), is(0));
assertThat(parsed.getDispositions().size(), is(1));
assertThat(parsed.getObs().size(), is(0));
assertThat(path(parsed.getDispositions(), 0, "disposition"), is((Object) "Admit"));
assertThat(
path(parsed.getDispositions(), 0, "additionalObs"), is((Object) Collections.emptyList()));
}
@Test
public void testParsingSimpleObs() throws Exception {
ConceptDatatype textDatatype = conceptService.getConceptDatatypeByName("Text");
ConceptClass misc = conceptService.getConceptClassByName("Misc");
String consultNote =
"Consult note"; // intentionally the same as what will result from
// capitalizeFirstLetter(consultNote)
String valueText = "Patient is here for blah blah blah.";
Concept consultComments =
new ConceptBuilder(conceptService, textDatatype, misc).addName(consultNote).get();
encounter.addObs(new ObsBuilder().setConcept(consultComments).setValue(valueText).get());
ParsedObs parsed = parser.parseObservations(Locale.ENGLISH);
assertThat(parsed.getDiagnoses().size(), is(0));
assertThat(parsed.getDispositions().size(), is(0));
assertThat(parsed.getObs().size(), is(1));
assertThat(path(parsed.getObs(), 0, "question"), is((Object) consultNote));
assertThat(path(parsed.getObs(), 0, "answer"), is((Object) valueText));
}
@Test
public void testParsingObsWithLocationAnswer() throws Exception {
ConceptDatatype textDatatype = conceptService.getConceptDatatypeByName("Text");
ConceptClass misc = conceptService.getConceptClassByName("Misc");
Location xanadu = new Location();
xanadu.setName("Xanadu");
when(locationService.getLocation(2)).thenReturn(xanadu);
Concept someLocation =
new ConceptBuilder(conceptService, textDatatype, misc).addName("Some location").get();
encounter.addObs(
new ObsBuilder()
.setConcept(someLocation)
.setValue("2")
.setComment("org.openmrs.Location")
.get());
ParsedObs parsed = parser.parseObservations(Locale.ENGLISH);
;
assertThat(parsed.getObs().size(), is(1));
assertThat(path(parsed.getObs(), 0, "question"), is((Object) "Some location"));
assertThat(path(parsed.getObs(), 0, "answer"), is((Object) "Xanadu"));
}
@Test
public void testParsingDiagnoses() throws Exception {
encounter.addObs(
diagnosisMetadata.buildDiagnosisObsGroup(
new Diagnosis(new CodedOrFreeTextAnswer("Random Disease"), Diagnosis.Order.PRIMARY)));
ParsedObs parsed = parser.parseObservations(Locale.ENGLISH);
assertThat(parsed.getDiagnoses().size(), is(1));
assertThat(parsed.getDispositions().size(), is(0));
assertThat(parsed.getObs().size(), is(0));
assertThat(
path(parsed.getDiagnoses(), 0, "question"),
is((Object) "coreapps.patientDashBoard.diagnosisQuestion.PRIMARY"));
assertThat(
path(parsed.getDiagnoses(), 0, "answer"),
is((Object) "(coreapps.Diagnosis.Certainty.PRESUMED) \"Random Disease\""));
assertThat(path(parsed.getDiagnoses(), 0, "order"), is((Object) 0));
}
@Test
public void testParsingDispositionWithTransferLocation() throws Exception {
Concept admit =
new ConceptBuilder(
null,
conceptService.getConceptDatatypeByName("N/A"),
conceptService.getConceptClassByName("Misc"))
.addName("Transfer")
.get();
when(emrConceptService.getConcept("test:transfer")).thenReturn(admit);
Obs dispositionObs =
dispositionDescriptor.buildObsGroup(
new Disposition(
"emrapi.transfer",
"Transfer",
"test:transfer",
Collections.<String>emptyList(),
Collections.<DispositionObs>emptyList()),
emrConceptService);
Obs transferLocationObs = new Obs();
transferLocationObs.setObsId(100);
transferLocationObs.setConcept(dispositionDescriptor.getInternalTransferLocationConcept());
transferLocationObs.setValueText("3");
dispositionObs.addGroupMember(transferLocationObs);
Location transferLocation = new Location();
transferLocation.setName("Outpatient clinic");
when(locationService.getLocation(3)).thenReturn(transferLocation);
encounter.addObs(doNotGoToServiceToFormatMembers(dispositionObs));
ParsedObs parsed = parser.parseObservations(Locale.ENGLISH);
SimpleObject expectedTransferLocationObject =
SimpleObject.create("obsId", transferLocationObs.getObsId());
expectedTransferLocationObject.put("question", "Transfer location");
expectedTransferLocationObject.put("answer", "Outpatient clinic");
List<SimpleObject> expectedAdditionalObsList = new ArrayList<SimpleObject>();
expectedAdditionalObsList.add(expectedTransferLocationObject);
assertThat(parsed.getDiagnoses().size(), is(0));
assertThat(parsed.getDispositions().size(), is(1));
assertThat(parsed.getObs().size(), is(0));
assertThat(path(parsed.getDispositions(), 0, "disposition"), is((Object) "Transfer"));
assertThat(
path(parsed.getDispositions(), 0, "additionalObs"), is((Object) expectedAdditionalObsList));
}
@Test
public void testParsingDispositionWithDateOfDeath() throws Exception {
Concept admit =
new ConceptBuilder(
null,
conceptService.getConceptDatatypeByName("N/A"),
conceptService.getConceptClassByName("Misc"))
.addName("Death")
.get();
when(emrConceptService.getConcept("test:death")).thenReturn(admit);
Obs dispositionObs =
dispositionDescriptor.buildObsGroup(
new Disposition(
"emrapi.death",
"Death",
"test:death",
Collections.<String>emptyList(),
Collections.<DispositionObs>emptyList()),
emrConceptService);
Date dateOfDeath = new DateTime(2012, 2, 20, 10, 10, 10).toDate();
Obs dateOfDeathObs = new Obs();
dateOfDeathObs.setObsId(100);
dateOfDeathObs.setConcept(dispositionDescriptor.getDateOfDeathConcept());
dateOfDeathObs.setValueDate(dateOfDeath);
dispositionObs.addGroupMember(dateOfDeathObs);
encounter.addObs(doNotGoToServiceToFormatMembers(dispositionObs));
ParsedObs parsed = parser.parseObservations(Locale.ENGLISH);
SimpleObject expectedAdmissionLocationObject =
SimpleObject.create("obsId", dateOfDeathObs.getObsId());
expectedAdmissionLocationObject.put("question", "Date of death");
expectedAdmissionLocationObject.put("answer", "20 Feb 2012 10:10 AM");
List<SimpleObject> expectedAdditionalObsList = new ArrayList<SimpleObject>();
expectedAdditionalObsList.add(expectedAdmissionLocationObject);
assertThat(parsed.getDiagnoses().size(), is(0));
assertThat(parsed.getDispositions().size(), is(1));
assertThat(parsed.getObs().size(), is(0));
assertThat(path(parsed.getDispositions(), 0, "disposition"), is((Object) "Death"));
assertThat(
path(parsed.getDispositions(), 0, "additionalObs"), is((Object) expectedAdditionalObsList));
}