public void init() {
setForeground(Color.black);
setTitle("DTI Create List File " + " v1.0");
GridBagLayout gbl = new GridBagLayout();
GridBagConstraints mainPanelConstraints = new GridBagConstraints();
JPanel mainPanel = new JPanel(gbl);
performRegistrationCheckbox = new JCheckBox("Register first");
performRegistrationCheckbox.setFont(serif12B);
performRegistrationCheckbox.setSelected(false);
performRegistrationCheckbox.addActionListener(this);
performRegistrationCheckbox.setActionCommand("performRegistrationCheckbox");
performRegistrationCheckbox.setEnabled(false);
registrationSettingsButton = new JButton("Registration Settings");
registrationSettingsButton.setFont(serif12B);
registrationSettingsButton.setEnabled(false);
registrationSettingsButton.addActionListener(this);
registrationSettingsButton.setActionCommand("registrationSettingsButton");
dicomB0VolumeLabel = new JLabel("DICOM B0 volume: ");
dicomB0VolumeLabel.setFont(serif12B);
dicomB0VolumeLabel.setEnabled(false);
dicomB0VolumeTextField = new JTextField(55);
dicomB0VolumeTextField.setEditable(false);
dicomB0VolumeTextField.setEnabled(false);
dicomB0VolumeTextField.setBorder(new LineBorder(Color.gray));
dicomB0VolumeBrowseButton = new JButton("Browse");
dicomB0VolumeBrowseButton.setFont(serif12B);
dicomB0VolumeBrowseButton.addActionListener(this);
dicomB0VolumeBrowseButton.setActionCommand("dicomB0VolumeBrowse");
dicomB0VolumeBrowseButton.setEnabled(false);
JLabel dicomB0InfoLabel = new JLabel("Select the first image slice in the volume");
dicomB0InfoLabel.setFont(serif12B);
dicomB0InfoLabel.setEnabled(false);
JPanel regPanel = new JPanel(gbl);
regPanel.setBorder(buildTitledBorder("Registration"));
GridBagConstraints regPanelConstraints = new GridBagConstraints();
regPanelConstraints.gridx = 0;
regPanelConstraints.gridy = 0;
regPanelConstraints.anchor = GridBagConstraints.WEST;
regPanelConstraints.insets = new Insets(0, 5, 15, 5);
regPanel.add(performRegistrationCheckbox, regPanelConstraints);
regPanelConstraints.gridx = 1;
regPanelConstraints.gridy = 0;
regPanelConstraints.insets = new Insets(0, 5, 15, 5);
regPanel.add(registrationSettingsButton, regPanelConstraints);
regPanelConstraints.gridx = 0;
regPanelConstraints.gridy = 1;
regPanelConstraints.insets = new Insets(0, 5, 5, 5);
regPanel.add(dicomB0VolumeLabel, regPanelConstraints);
regPanelConstraints.gridx = 1;
regPanelConstraints.gridy = 1;
regPanelConstraints.insets = new Insets(0, 5, 5, 5);
regPanel.add(dicomB0VolumeTextField, regPanelConstraints);
regPanelConstraints.gridx = 2;
regPanelConstraints.gridy = 1;
regPanelConstraints.insets = new Insets(0, 5, 5, 5);
regPanel.add(dicomB0VolumeBrowseButton, regPanelConstraints);
regPanelConstraints.gridx = 1;
regPanelConstraints.gridy = 2;
regPanelConstraints.gridwidth = 3;
regPanelConstraints.anchor = GridBagConstraints.CENTER;
regPanelConstraints.insets = new Insets(0, 5, 15, 5);
regPanel.add(dicomB0InfoLabel, regPanelConstraints);
mainPanelConstraints.gridx = 0;
mainPanelConstraints.gridy = 0;
mainPanelConstraints.insets = new Insets(15, 5, 5, 0);
mainPanelConstraints.gridwidth = 1;
mainPanelConstraints.anchor = GridBagConstraints.WEST;
dwiLabel = new JLabel(" DWI data : ");
dwiLabel.setFont(serif12B);
mainPanel.add(dwiLabel, mainPanelConstraints);
mainPanelConstraints.gridx = 1;
mainPanelConstraints.gridy = 0;
mainPanelConstraints.insets = new Insets(15, 5, 5, 0);
dwiPathTextField = new JTextField(55);
dwiPathTextField.setEditable(false);
// dwiPathTextField.setBackground(Color.white);
dwiPathTextField.setBorder(new LineBorder(Color.black));
mainPanel.add(dwiPathTextField, mainPanelConstraints);
mainPanelConstraints.gridx = 2;
mainPanelConstraints.gridy = 0;
mainPanelConstraints.insets = new Insets(15, 5, 5, 5);
dwiPathBrowseButton = new JButton("Browse");
dwiPathBrowseButton.setFont(serif12B);
dwiPathBrowseButton.addActionListener(this);
dwiPathBrowseButton.setActionCommand("dwiPathBrowse");
mainPanel.add(dwiPathBrowseButton, mainPanelConstraints);
// mainPanelConstraints.anchor = GridBagConstraints.CENTER;
// interleavedCheckbox = new JCheckBox(" interleaved dataset");
// mainPanelConstraints.gridx = 1;
// mainPanelConstraints.gridy = 1;
// mainPanelConstraints.insets = new Insets(0,5,55,5);
// mainPanel.add(interleavedCheckbox, mainPanelConstraints);
mainPanelConstraints.anchor = GridBagConstraints.CENTER;
JLabel dwiDataInfoLabel =
new JLabel(
"For DICOM datasets, select the top level study directory. For Par/Rec datasets, select the .rec file");
dwiDataInfoLabel.setFont(serif12B);
dwiDataInfoLabel.setEnabled(false);
mainPanelConstraints.gridx = 0;
mainPanelConstraints.gridy = 1;
mainPanelConstraints.gridwidth = 3;
mainPanelConstraints.insets = new Insets(0, 5, 70, 5);
mainPanel.add(dwiDataInfoLabel, mainPanelConstraints);
mainPanelConstraints.anchor = GridBagConstraints.WEST;
optionsGroup = new ButtonGroup();
gradFileRadio = new JRadioButton(" gradient file : ");
gradFileRadio.setFont(serif12B);
gradFileRadio.setSelected(true);
gradFileRadio.addActionListener(this);
gradFileRadio.setActionCommand("gradFileRadio");
optionsGroup.add(gradFileRadio);
mainPanelConstraints.gridx = 0;
mainPanelConstraints.gridy = 2;
mainPanelConstraints.gridwidth = 1;
mainPanelConstraints.insets = new Insets(0, 5, 15, 0);
mainPanel.add(gradFileRadio, mainPanelConstraints);
mainPanelConstraints.gridx = 1;
mainPanelConstraints.gridy = 2;
mainPanelConstraints.insets = new Insets(0, 5, 15, 0);
gradientFilePathTextField = new JTextField(55);
gradientFilePathTextField.setEditable(false);
gradientFilePathTextField.setBorder(new LineBorder(Color.black));
// gradientFilePathTextField.setBackground(Color.white);
mainPanel.add(gradientFilePathTextField, mainPanelConstraints);
mainPanelConstraints.gridx = 2;
mainPanelConstraints.gridy = 2;
mainPanelConstraints.insets = new Insets(0, 5, 15, 5);
gradientFileBrowseButton = new JButton("Browse");
gradientFileBrowseButton.setFont(serif12B);
gradientFileBrowseButton.addActionListener(this);
gradientFileBrowseButton.setActionCommand("gradientFileBrowse");
mainPanel.add(gradientFileBrowseButton, mainPanelConstraints);
bmtxtFileRadio = new JRadioButton(" b-matrix file : ");
bmtxtFileRadio.setFont(serif12B);
bmtxtFileRadio.setSelected(false);
bmtxtFileRadio.addActionListener(this);
bmtxtFileRadio.setActionCommand("bmtxtFileRadio");
optionsGroup.add(bmtxtFileRadio);
mainPanelConstraints.gridx = 0;
mainPanelConstraints.gridy = 3;
mainPanelConstraints.insets = new Insets(0, 5, 5, 0);
mainPanel.add(bmtxtFileRadio, mainPanelConstraints);
mainPanelConstraints.gridx = 1;
mainPanelConstraints.gridy = 3;
mainPanelConstraints.insets = new Insets(0, 5, 5, 0);
bmtxtFilePathTextField = new JTextField(55);
bmtxtFilePathTextField.setText("");
bmtxtFilePathTextField.setEnabled(false);
bmtxtFilePathTextField.setEditable(false);
bmtxtFilePathTextField.setBorder(new LineBorder(Color.gray));
// bmtxtFilePathTextField.setBackground(Color.lightGray);
mainPanel.add(bmtxtFilePathTextField, mainPanelConstraints);
mainPanelConstraints.gridx = 2;
mainPanelConstraints.gridy = 3;
mainPanelConstraints.insets = new Insets(0, 5, 5, 5);
bmtxtFileBrowseButton = new JButton("Browse");
bmtxtFileBrowseButton.setFont(serif12B);
bmtxtFileBrowseButton.addActionListener(this);
bmtxtFileBrowseButton.setActionCommand("bmtxtFileBrowse");
bmtxtFileBrowseButton.setEnabled(false);
mainPanel.add(bmtxtFileBrowseButton, mainPanelConstraints);
mainPanelConstraints.anchor = GridBagConstraints.CENTER;
mainPanelConstraints.gridx = 0;
mainPanelConstraints.gridy = 4;
mainPanelConstraints.gridwidth = 3;
mainPanelConstraints.insets = new Insets(0, 5, 30, 5);
JLabel parRecInfoLabel =
new JLabel(
"Gradient file or b-matrix file must be provided for all DICOM study directories and for versions 4.0 and earlier of Par/Rec");
parRecInfoLabel.setFont(serif12B);
parRecInfoLabel.setEnabled(false);
mainPanel.add(parRecInfoLabel, mainPanelConstraints);
// mainPanelConstraints.anchor = GridBagConstraints.CENTER;
// mainPanelConstraints.gridx = 1;
// mainPanelConstraints.gridy = 4;
// mainPanelConstraints.insets = new Insets(10,5,5,5);
// JLabel interleavedLabel = new JLabel("* for interleaved datasets, b-matrix file is
// required");
// mainPanel.add(interleavedLabel, mainPanelConstraints);
mainPanelConstraints.gridx = 0;
mainPanelConstraints.gridy = 5;
mainPanelConstraints.insets = new Insets(15, 5, 15, 0);
mainPanelConstraints.gridwidth = 3;
mainPanelConstraints.anchor = GridBagConstraints.CENTER;
mainPanel.add(regPanel, mainPanelConstraints);
mainPanelConstraints.gridx = 0;
mainPanelConstraints.gridy = 6;
mainPanelConstraints.gridwidth = 3;
mainPanelConstraints.insets = new Insets(15, 5, 15, 5);
outputTextArea = new JTextArea(15, 70);
outputTextArea.setEditable(false);
outputTextArea.setBackground(Color.lightGray);
outputTextArea.setBorder(new LineBorder(Color.black));
outputTextArea.setForeground(Color.black);
scrollPane =
new JScrollPane(
outputTextArea,
ScrollPaneConstants.VERTICAL_SCROLLBAR_AS_NEEDED,
ScrollPaneConstants.HORIZONTAL_SCROLLBAR_AS_NEEDED);
mainPanel.add(scrollPane, mainPanelConstraints);
mainPanelConstraints.gridx = 0;
mainPanelConstraints.gridy = 7;
mainPanelConstraints.gridwidth = 3;
mainPanelConstraints.insets = new Insets(15, 5, 15, 5);
JLabel refLabel =
new JLabel(
"Developed in concert with Dr. Lin-Ching Chang D.Sc., Dr. Carlo Pierpaoli MD Ph.D., and Lindsay Walker MS from the NIH/NICHD/LIMB/STBB group");
refLabel.setFont(serif12B);
mainPanel.add(refLabel, mainPanelConstraints);
JPanel OKCancelPanel = new JPanel();
buildOKButton();
OKButton.setActionCommand("ok");
OKButton.setFont(serif12B);
OKCancelPanel.add(OKButton);
buildCancelButton();
cancelButton.setActionCommand("cancel");
cancelButton.setFont(serif12B);
OKCancelPanel.add(cancelButton);
buildHelpButton();
helpButton.setActionCommand("help");
helpButton.setFont(serif12B);
OKCancelPanel.add(helpButton);
getContentPane().add(mainPanel, BorderLayout.CENTER);
getContentPane().add(OKCancelPanel, BorderLayout.SOUTH);
pack();
setResizable(false);
setVisible(true);
}
