Exemplo n.º 1
0
  /** *************************************************************************** */
  public void printInfo() {
    FastaSequence sequence = null;

    System.out.print(" #  Seq. Name  Gene     ID   Taxon.     Species   ");
    System.out.println("           group %ident Product");
    for (int i = 0; i < total; i++) {
      sequence = best[i].getFastaSequence();

      Format.intWidth(i, 3);
      System.out.print(" " + sequence.getShortName(10));
      System.out.print(" " + LineTools.pad(sequence.getGene(), 8));
      System.out.print(" " + LineTools.pad(sequence.getId(), 4));
      System.out.print(" " + LineTools.pad(sequence.getTaxonKey(), 10));
      System.out.print(" " + LineTools.pad(sequence.getSpecies(), 20));
      System.out.print("  g_");
      Format.intWidthPost(best[i].getGroup(), 3);
      System.out.print("  ");
      Format.intWidth(best[i].getPercentFirst(), 3);
      System.out.print("%  " + sequence.getDef());
      System.out.println();
    } // for
    System.out.println();
  } // method printInfo