@Override
public Contributor[] getMaintainers() {
final Contributor contributor1 = new Contributor("Nathaniel Oco");
contributor1.setUrl("http://www.dlsu.edu.ph/research/centers/adric/nlp/");
final Contributor contributor2 = new Contributor("Allan Borra");
contributor2.setUrl("http://www.dlsu.edu.ph/research/centers/adric/nlp/faculty/borra.asp");
return new Contributor[] {contributor1, contributor2};
}
/**
* Updates local contribution and commands. Called before information exchange attempts. Uses
* local address of contributor (if it is not null), this is replaced on the other side of the
* communication channel by the correct global address.
*/
private synchronized void updateLocalInfo() {
if (contributor != null) {
myContribution =
new ContributionBox(new Address(contributor.getName()), contributor.getContribution());
}
final Long now = new Long(System.currentTimeMillis());
if (controller != null) {
Set newcomms = controller.getCommands();
if (newcomms == null) return;
Iterator i = newcomms.iterator();
while (i.hasNext()) commands.put(i.next(), now);
}
}
/**
* Handles a message. Knows type "collectiveUpdate-"+name only. It is the responsibility of the
* owner to propagate messages of this type using this method.
*/
public boolean handleMessage(Message m, Object o) {
if (!shouldLive || !m.getType().equals("collectiveUpdate-" + name)) return false;
final String logSender = observer + "#collectiveUpdate";
Logger.debug(logSender, "Update from " + m.getSender());
/**/
if (!m.getRecipient().name.equals(contributor.getName()))
Logger.warning(
logSender,
"Recipient and my contributor are not the same:\n"
+ "Recipient: "
+ m.getRecipient().name
+ "\n"
+ "Contributor: "
+ contributor.getName(),
null);
/**/
Collective c = (Collective) o;
// --- reset array representations
cacheCollection = null;
commandCollection = null;
// --- remove possible garbage
cache.remove(m.getRecipient().name);
c.cache.remove(m.getRecipient().name);
cache.remove(m.getSender().name);
c.cache.remove(m.getSender().name);
// --- sending our contributions
if (contributor == null)
Logger.warning(logSender, "Non-contributor observer is known by " + m.getSender(), null);
updateLocalInfo();
m.setReply(this);
// --- update containers
repairSenderAddress(c, m.getSender());
merge(c);
observer.collectiveUpdated((ContributionBox) cache.get(m.getSender().name));
return true;
}
/**
* Construct a Collective object.
*
* @param c The contributions, the commands and the name will be initialized from this object.
* @param o The observer that reads information from the collective. It must be non-null.
* @param cb The contributor that contributes to the collective effort.
* @param c The controller that issues collective-wide commands.
*/
public Collective(Collective c, Observer o, Contributor cb, Controller cr) {
this(c.name, o, cb, cr);
if (c == null) throw new IllegalArgumentException("null collective");
if (c.cache != null) cache.putAll(c.cache);
if (c.commands != null) commands.putAll(c.commands);
if (contributor != null) cache.remove(contributor.getName());
}
/**
* Returns a string describing the project.
*
* @return a string describing the project.
*/
public String toString() {
String result = getName() + " version " + getVersion() + ".\n";
result = result + getCopyright() + ".\n";
result = result + "\n";
result = result + "For terms of use, see the licence below.\n";
result = result + "\n";
result = result + "FURTHER INFORMATION:";
result = result + getInfo();
result = result + "\n";
result = result + "CONTRIBUTORS:";
List contributors = getContributors();
if (contributors != null) {
Iterator iterator = getContributors().iterator();
while (iterator.hasNext()) {
Contributor contributor = (Contributor) iterator.next();
result = result + contributor.getName() + " (" + contributor.getEmail() + ").";
}
} else {
result = result + "None";
}
result = result + "\n";
result = result + "OTHER LIBRARIES USED BY " + getName() + ":";
List libraries = getLibraries();
if (libraries != null) {
Iterator iterator = getLibraries().iterator();
while (iterator.hasNext()) {
Library lib = (Library) iterator.next();
result = result + lib.getName() + " " + lib.getVersion() + " (" + lib.getInfo() + ").";
}
} else {
result = result + "None";
}
result = result + "\n";
result = result + getName() + " LICENCE TERMS:";
result = result + "\n";
result = result + getLicenceText();
return result;
}
@Override
public Contributor[] getMaintainers() {
final Contributor contributor = new Contributor("Zdenko Podobný");
contributor.setUrl("http://sk-spell.sk.cx");
return new Contributor[] {contributor};
}
/**
* Initiates an information exchange with a known and living other base if such a base exists.
*
* @return true if refresh was succesful, false otherwise.
*/
private boolean refresh() {
final String logSender = observer + "#refresh";
final String contrName = ((contributor != null) ? contributor.getName() : null);
// --- refreshing local contribution and commands
updateLocalInfo();
// --- creating a random permutation of peers
Vector peers = null;
synchronized (cache) {
peers = new Vector(cache.values());
// just to be sure, shouldn't be there anyway
if (contrName != null) peers.remove(cache.get(contrName));
}
Collections.shuffle(peers);
if (peers.isEmpty()) {
Logger.debug(logSender, "no peers in cache");
return false;
}
// --- reset array representations
cacheCollection = null;
commandCollection = null;
// --- trying to talk to random peer
IRequest answer = null;
Address peer = null;
for (int i = 0; i < peers.size(); ++i) {
if (!shouldLive) return false;
peer = ((ContributionBox) peers.get(i)).contributor;
Logger.debug(logSender, "asking " + peer);
answer = observer.fireMessage(peer, "collectiveUpdate-" + name, this);
while (answer.getStatus() == IRequest.WAITING) {
try {
Thread.sleep(100);
} catch (Exception e) {
}
}
if (answer.getStatus() == IRequest.DONE) break;
Logger.debug(logSender, "not accessable: " + peer);
}
if (answer.getStatus() != IRequest.DONE) {
Logger.debug(logSender, "no accessable peers");
observer.collectiveUpdated(null);
return false;
} else {
Collective c = (Collective) answer.getInfo("reply");
// --- remove possible garbage
if (contributor != null) {
cache.remove(contributor.getName());
c.cache.remove(contributor.getName());
}
cache.remove(peer.name);
c.cache.remove(peer.name);
repairSenderAddress(c, peer);
merge(c);
observer.collectiveUpdated((ContributionBox) cache.get(c.myContribution.contributor.name));
return true;
}
}
@Deprecated
public static FundingForm valueOf(org.orcid.jaxb.model.message.Funding funding) {
FundingForm result = new FundingForm();
result.setDateSortString(
PojoUtil.createDateSortString(funding.getStartDate(), funding.getEndDate()));
if (funding.getPutCode() != null) result.setPutCode(Text.valueOf(funding.getPutCode()));
if (funding.getAmount() != null) {
if (StringUtils.isNotEmpty(funding.getAmount().getContent())) {
String cleanNumber = funding.getAmount().getContent().trim();
result.setAmount(Text.valueOf(cleanNumber));
}
if (funding.getAmount().getCurrencyCode() != null)
result.setCurrencyCode(Text.valueOf(funding.getAmount().getCurrencyCode()));
else result.setCurrencyCode(new Text());
} else {
result.setAmount(new Text());
result.setCurrencyCode(new Text());
}
if (StringUtils.isNotEmpty(funding.getDescription()))
result.setDescription(Text.valueOf(funding.getDescription()));
else result.setDescription(new Text());
if (funding.getStartDate() != null) result.setStartDate(Date.valueOf(funding.getStartDate()));
if (funding.getEndDate() != null) result.setEndDate(Date.valueOf(funding.getEndDate()));
if (funding.getType() != null) result.setFundingType(Text.valueOf(funding.getType().value()));
else result.setFundingType(new Text());
if (funding.getOrganizationDefinedFundingType() != null) {
OrgDefinedFundingSubType OrgDefinedFundingSubType = new OrgDefinedFundingSubType();
OrgDefinedFundingSubType.setSubtype(
Text.valueOf(funding.getOrganizationDefinedFundingType().getContent()));
OrgDefinedFundingSubType.setAlreadyIndexed(false);
result.setOrganizationDefinedFundingSubType(OrgDefinedFundingSubType);
}
org.orcid.jaxb.model.message.Source source = funding.getSource();
if (source != null) {
result.setSource(source.retrieveSourcePath());
if (source.getSourceName() != null) {
result.setSourceName(source.getSourceName().getContent());
}
}
if (funding.getTitle() != null) {
FundingTitleForm fundingTitle = new FundingTitleForm();
if (funding.getTitle().getTitle() != null)
fundingTitle.setTitle(Text.valueOf(funding.getTitle().getTitle().getContent()));
else fundingTitle.setTitle(new Text());
if (funding.getTitle().getTranslatedTitle() != null) {
TranslatedTitleForm translatedTitle = new TranslatedTitleForm();
translatedTitle.setContent(funding.getTitle().getTranslatedTitle().getContent());
translatedTitle.setLanguageCode(funding.getTitle().getTranslatedTitle().getLanguageCode());
fundingTitle.setTranslatedTitle(translatedTitle);
}
result.setFundingTitle(fundingTitle);
} else {
FundingTitleForm fundingTitle = new FundingTitleForm();
fundingTitle.setTitle(new Text());
result.setFundingTitle(fundingTitle);
}
if (funding.getUrl() != null) result.setUrl(Text.valueOf(funding.getUrl().getValue()));
else result.setUrl(new Text());
if (funding.getVisibility() != null)
result.setVisibility(Visibility.valueOf(funding.getVisibility()));
// Set the disambiguated organization
org.orcid.jaxb.model.message.Organization organization = funding.getOrganization();
result.setFundingName(Text.valueOf(organization.getName()));
org.orcid.jaxb.model.message.DisambiguatedOrganization disambiguatedOrganization =
organization.getDisambiguatedOrganization();
if (disambiguatedOrganization != null) {
if (StringUtils.isNotEmpty(
disambiguatedOrganization.getDisambiguatedOrganizationIdentifier())) {
result.setDisambiguatedFundingSourceId(
Text.valueOf(disambiguatedOrganization.getDisambiguatedOrganizationIdentifier()));
result.setDisambiguationSource(
Text.valueOf(disambiguatedOrganization.getDisambiguationSource()));
}
}
org.orcid.jaxb.model.message.OrganizationAddress organizationAddress =
organization.getAddress();
if (organizationAddress != null) {
if (!PojoUtil.isEmpty(organizationAddress.getCity()))
result.setCity(Text.valueOf(organizationAddress.getCity()));
else result.setCity(new Text());
if (!PojoUtil.isEmpty(organizationAddress.getRegion()))
result.setRegion(Text.valueOf(organizationAddress.getRegion()));
else result.setRegion(new Text());
if (organizationAddress.getCountry() != null)
result.setCountry(Text.valueOf(organizationAddress.getCountry().value()));
else result.setCountry(new Text());
} else {
result.setCountry(new Text());
result.setCity(new Text());
result.setRegion(new Text());
}
// Set contributors
if (funding.getFundingContributors() != null) {
List<Contributor> contributors = new ArrayList<Contributor>();
for (org.orcid.jaxb.model.message.FundingContributor fContributor :
funding.getFundingContributors().getContributor()) {
Contributor contributor = Contributor.valueOf(fContributor);
contributors.add(contributor);
}
result.setContributors(contributors);
}
List<FundingExternalIdentifierForm> externalIdentifiersList =
new ArrayList<FundingExternalIdentifierForm>();
// Set external identifiers
if (funding.getFundingExternalIdentifiers() != null) {
for (org.orcid.jaxb.model.message.FundingExternalIdentifier fExternalIdentifier :
funding.getFundingExternalIdentifiers().getFundingExternalIdentifier()) {
FundingExternalIdentifierForm fundingExternalIdentifierForm =
FundingExternalIdentifierForm.valueOf(fExternalIdentifier);
externalIdentifiersList.add(fundingExternalIdentifierForm);
}
}
result.setExternalIdentifiers(externalIdentifiersList);
result.setCreatedDate(Date.valueOf(funding.getCreatedDate()));
result.setLastModified(Date.valueOf(funding.getLastModifiedDate()));
return result;
}
public Funding toFunding() {
Funding result = new Funding();
Amount orcidAmount = new Amount();
if (!PojoUtil.isEmpty(amount)) orcidAmount.setContent(amount.getValue());
if (!PojoUtil.isEmpty(currencyCode)) orcidAmount.setCurrencyCode(currencyCode.getValue());
result.setAmount(orcidAmount);
if (!PojoUtil.isEmpty(description)) result.setDescription(description.getValue());
if (!PojoUtil.isEmpty(startDate)) result.setStartDate(new FuzzyDate(startDate.toFuzzyDate()));
if (!PojoUtil.isEmpty(endDate)) result.setEndDate(new FuzzyDate(endDate.toFuzzyDate()));
if (!PojoUtil.isEmpty(putCode)) result.setPutCode(Long.valueOf(putCode.getValue()));
if (fundingTitle != null) {
result.setTitle(fundingTitle.toFundingTitle());
}
if (!PojoUtil.isEmpty(fundingType))
result.setType(FundingType.fromValue(fundingType.getValue()));
if (organizationDefinedFundingSubType != null
&& !PojoUtil.isEmpty(organizationDefinedFundingSubType.getSubtype()))
result.setOrganizationDefinedType(
new OrganizationDefinedFundingSubType(
organizationDefinedFundingSubType.getSubtype().getValue()));
if (!PojoUtil.isEmpty(url)) result.setUrl(new Url(url.getValue()));
else result.setUrl(new Url(""));
if (visibility != null)
result.setVisibility(
org.orcid.jaxb.model.common_rc2.Visibility.fromValue(visibility.getVisibility().value()));
// Set Organization
Organization organization = new Organization();
if (!PojoUtil.isEmpty(fundingName)) organization.setName(fundingName.getValue());
OrganizationAddress organizationAddress = new OrganizationAddress();
organization.setAddress(organizationAddress);
if (!PojoUtil.isEmpty(city)) organizationAddress.setCity(city.getValue());
if (!PojoUtil.isEmpty(region)) {
organizationAddress.setRegion(region.getValue());
}
if (!PojoUtil.isEmpty(country)) {
organizationAddress.setCountry(Iso3166Country.fromValue(country.getValue()));
}
if (!PojoUtil.isEmpty(disambiguatedFundingSourceId)) {
organization.setDisambiguatedOrganization(new DisambiguatedOrganization());
organization
.getDisambiguatedOrganization()
.setDisambiguatedOrganizationIdentifier(disambiguatedFundingSourceId.getValue());
organization
.getDisambiguatedOrganization()
.setDisambiguationSource(disambiguationSource.getValue());
}
result.setOrganization(organization);
// Set contributors
if (contributors != null && !contributors.isEmpty()) {
FundingContributors fContributors = new FundingContributors();
for (Contributor contributor : contributors) {
if (!PojoUtil.isEmtpy(contributor))
fContributors.getContributor().add(contributor.toFundingContributor());
}
result.setContributors(fContributors);
}
// Set external identifiers
if (externalIdentifiers != null && !externalIdentifiers.isEmpty()) {
FundingExternalIdentifiers fExternalIdentifiers = new FundingExternalIdentifiers();
for (FundingExternalIdentifierForm fExternalIdentifier : externalIdentifiers) {
if (!PojoUtil.isEmtpy(fExternalIdentifier))
fExternalIdentifiers
.getExternalIdentifier()
.add(fExternalIdentifier.toFundingExternalIdentifier());
}
result.setExternalIdentifiers(fExternalIdentifiers);
}
return result;
}
