/**
* Creates the mapping object.
*
* @param conceptId the concept id
*/
private void createMappingObject(String conceptId) {
SnomedConcept concept = TerminologyConceptUtils.getConceptForID(testTerminologyDAO, conceptId);
assertNotNull("Concept must not be null", concept);
// create expression object.
ClinicalExpression clinicalExpression =
testEntityFactoryService.getExpression(new CloseToUserExpressionImpl(concept));
assertNotNull("Clinical Expression can not be null", clinicalExpression);
ExpressionMappingObject expressionMappingObject = new ExpressionMappingObjectImpl();
expressionMappingObject.setCloseToUserCGForm(clinicalExpression.getCompositionalGrammarForm());
expressionMappingObject.setNormalFormCGForm(
clinicalExpression.getCompositionalGrammarNormalForm());
expressionMappingObject.setSituationNormalFormCGForm(
clinicalExpression.getCompositionalSituationNormalForm());
expressionMappingObject.setCloseToUserExpressionUuid(clinicalExpression.getUuid());
expressionMappingObject.setNormalFormExpressionUuid(clinicalExpression.getNormalFormUuid());
expressionMappingObject.setSituationNormalFormExpressionUuid(
clinicalExpression.getSituationNormalFormUuid());
assertNotNull("Expression Mapping Object can not be null", expressionMappingObject);
assertNotNull("Expression Mapping object DAO can not be null", testExpressionMappingObjectDAO);
// save object
testExpressionMappingObjectDAO.save(expressionMappingObject);
assertTrue(
"Repo DB must contain at least 1 record.",
testExpressionMappingObjectDAO.findAll().size() > 0);
}
/**
* Test generate tc table.
*
* @throws Exception the exception
*/
public void testGenerateTCTable() throws Exception {
// use testExpressionSubsumptionRelationshipDAO to remove all entries in TC table
testExpressionSubsumptionRelationshipDAO.deleteAll();
assertEquals(
"Database must contain 0 relationships after delete... ",
0,
testExpressionSubsumptionRelationshipDAO.findAllRelationships().size());
// now populate TC table
testExpressionTransitiveClosureTableGenerator.generateTCTable(true);
assertTrue(
"Database must contain more than one entry after populating...",
testExpressionSubsumptionRelationshipDAO.findAllRelationships().size() > 0);
// remove all entries in mapping objects table
testExpressionMappingObjectDAO.deleteAll();
}