/**
* Check for equality
*
* @param oo object in question
* @return true if equal
*/
public boolean equals(Object oo) {
if (this == oo) {
return true;
}
if (!(oo instanceof LevelCoord)) {
return false;
}
LevelCoord other = (LevelCoord) oo;
return (ucar.nc2.util.Misc.closeEnough(value1, other.value1)
&& ucar.nc2.util.Misc.closeEnough(value2, other.value2));
}
public void testAggCoordVar(NetcdfFile ncfile) {
Variable time = ncfile.findVariable("time");
assert null != time;
assert time.getShortName().equals("time");
assert time.getRank() == 1;
assert time.getSize() == 3;
assert time.getShape()[0] == 3;
assert time.getDataType() == DataType.DOUBLE;
assert time.getDimension(0) == ncfile.findDimension("time");
try {
Array data = time.read();
assert data.getRank() == 1;
assert data.getSize() == 3;
assert data.getShape()[0] == 3;
assert data.getElementType() == double.class;
int count = 0;
IndexIterator dataI = data.getIndexIterator();
while (dataI.hasNext()) {
assert Misc.closeEnough(dataI.getDoubleNext(), result[count]);
count++;
}
} catch (IOException io) {
io.printStackTrace();
assert false;
}
}
public void testAggCoordVar3(NetcdfFile ncfile) throws IOException {
Variable time = ncfile.findVariable("time");
assert null != time;
assert time.getShortName().equals("time");
assert time.getRank() == 1 : time.getRank();
assert time.getShape()[0] == 3;
assert time.getDataType() == DataType.DOUBLE : time.getDataType();
assert time.getDimension(0) == ncfile.findDimension("time");
Array data = time.read();
assert (data instanceof ArrayDouble);
IndexIterator dataI = data.getIndexIterator();
double val = dataI.getDoubleNext();
assert Misc.closeEnough(val, 0.0) : val;
assert Misc.closeEnough(dataI.getDoubleNext(), 10.0) : dataI.getDoubleCurrent();
assert Misc.closeEnough(dataI.getDoubleNext(), 99.0) : dataI.getDoubleCurrent();
}
public void testAggCoordVarSubsetDefeatLocalCache(NetcdfFile ncfile)
throws InvalidRangeException, IOException {
Variable time = ncfile.findVariable("time");
assert null != time;
assert time.getShortName().equals("time");
assert time.getRank() == 1;
assert time.getSize() == 3;
assert time.getShape()[0] == 3;
assert time.getDataType() == DataType.DOUBLE;
assert time.getDimension(0) == ncfile.findDimension("time");
time.setCachedData(null, false);
Array data = time.read("1:2");
assert data.getRank() == 1;
assert data.getSize() == 2;
assert data.getShape()[0] == 2;
assert data.getElementType() == double.class;
int count = 0;
IndexIterator dataI = data.getIndexIterator();
while (dataI.hasNext()) {
assert Misc.closeEnough(dataI.getDoubleNext(), result[count + 1]);
count++;
}
time.setCachedData(null, false);
data = time.read("0:2:2");
assert data.getRank() == 1;
assert data.getSize() == 2;
assert data.getShape()[0] == 2;
assert data.getElementType() == double.class;
count = 0;
dataI = data.getIndexIterator();
while (dataI.hasNext()) {
assert Misc.closeEnough(dataI.getDoubleNext(), result[count * 2]);
count++;
}
}
/**
* Get the coordinate index for the record
*
* @param record record in question
* @return index or -1 if not found
*/
private int coordIndex(GridRecord record) {
double val = record.getLevel1();
double val2 = record.getLevel2();
if (usesBounds && (val > val2)) {
val = record.getLevel2();
val2 = record.getLevel1();
}
for (int i = 0; i < levels.size(); i++) {
LevelCoord lc = (LevelCoord) levels.get(i);
if (usesBounds) {
if (ucar.nc2.util.Misc.closeEnough(lc.value1, val)
&& ucar.nc2.util.Misc.closeEnough(lc.value2, val2)) {
return i;
}
} else {
if (ucar.nc2.util.Misc.closeEnough(lc.value1, val)) {
return i;
}
}
}
return -1;
}
protected boolean protocheck(String path, String expected) {
if (expected == null) expected = "";
List<String> protocols = Misc.getProtocols(path);
StringBuilder buf = new StringBuilder();
for (String s : protocols) {
buf.append(s);
buf.append(":");
}
String result = buf.toString();
boolean ok = expected.equals(result);
System.err.printf("path=|%s| result=|%s| pass=%s\n", path, result, (ok ? "true" : "false"));
System.err.flush();
return ok;
}
/** return true if val equals a missing_value (low level) */
public boolean isMissingValue(double val) {
if (!hasMissingValue) return false;
for (double aMissingValue : missingValue) if (Misc.closeEnough(val, aMissingValue)) return true;
return false;
}
@Test
public void testArraySubset() throws IOException {
DODSNetcdfFile dodsfile = TestDODSRead.open("test.02?i32[1:10],f64[2:2:10]");
Variable v = null;
Array a = null;
// int32
assert (null != (v = dodsfile.findVariable("i32")));
assert v.getFullName().equals("i32");
assert v.getRank() == 1;
assert v.getSize() == 10;
assert v.getDataType() == DataType.INT;
a = v.read();
assert a.getRank() == 1;
assert a.getSize() == 25;
assert a.getElementType() == int.class;
assert a instanceof ArrayInt.D1;
ArrayInt.D1 ai = (ArrayInt.D1) a;
for (int i = 0; i < 10; i++) {
int val = ai.get(i);
assert (val == i * 2048) : val + " != " + (i * 2048);
}
// uint16
assert null == (v = dodsfile.findVariable("ui16"));
assert null == (v = dodsfile.findVariable("ui32"));
// double
assert (null != (v = dodsfile.findVariable("f64")));
assert v.getFullName().equals("f64");
assert v.getRank() == 1;
assert v.getSize() == 5;
assert v.getDataType() == DataType.DOUBLE : v.getDataType();
a = v.read();
assert a.getRank() == 1;
assert a.getSize() == 25;
assert a.getElementType() == double.class;
assert a instanceof ArrayDouble.D1;
ArrayDouble.D1 ad = (ArrayDouble.D1) a;
double[] tFloat64 =
new double[] {
1.0,
0.9999500004166653,
0.9998000066665778,
0.9995500337489875,
0.9992001066609779,
0.9987502603949663,
0.9982005399352042,
0.9975510002532796,
0.9968017063026194,
0.9959527330119943,
0.9950041652780257,
0.9939560979566968,
0.9928086358538663,
0.9915618937147881,
0.9902159962126371,
0.9887710779360422,
0.9872272833756269,
0.9855847669095608,
0.9838436927881214,
0.9820042351172703,
0.9800665778412416,
0.9780309147241483,
0.9758974493306055,
0.9736663950053749,
0.9713379748520297
};
for (int i = 0; i < 5; i++) {
double val = ad.get(i);
assert Misc.closeEnough(val, tFloat64[i], 1.0e-9);
}
dodsfile.close();
}