public SegmentedCellImages(Cell cell) {
this.cell = cell;
images = new ImageInt[cell.getNbStructures(true)];
probabilityMap = new ImageFloat[cell.getNbStructures(false)];
distanceMap = new ImageFloat[cell.getNbStructures(true)];
objects = new Object3DVoxels[images.length][];
}
public synchronized ImageFloat getProbabilityMap(int structureIdx) {
if (structureIdx <= 0 || structureIdx >= probabilityMap.length) return null;
if (probabilityMap[structureIdx] == null || !probabilityMap[structureIdx].isOpened())
probabilityMap[structureIdx] =
((Structure) cell.getStructure(structureIdx)).openProbabilityMap();
return probabilityMap[structureIdx];
}
@Override
public synchronized ImageInt getImage(int structureIdx) {
if (structureIdx < 0 || structureIdx >= images.length) return null;
if (images[structureIdx] == null || !images[structureIdx].isOpened())
images[structureIdx] = cell.getStructure(structureIdx).openSegmented();
return images[structureIdx];
}
public synchronized Object3DVoxels[] getObjects(int structureIdx) {
if (structureIdx < 0 || structureIdx >= objects.length) return null;
if (objects[structureIdx] == null) cell.getStructure(structureIdx).createObjects();
return objects[structureIdx];
}
