private Table processJournalName(Table table) throws IOException {
ScimapsJournalMatcher scimapsJournalMatcher = new ScimapsJournalMatcher();
// Create new output table
Table outputTable = TableUtilities.copyTable(table);
outputTable.addColumn(STANDARDIZED_JOURNAL_NAME_COLUMN, String.class);
int standardizedJournalNameColumnIndex =
outputTable.getColumnNumber(STANDARDIZED_JOURNAL_NAME_COLUMN);
// Retrieve iterator
Iterator<?> rows = outputTable.tuples();
// Process journal names
int rowIndex = 0;
while (rows.hasNext()) {
Tuple row = (Tuple) rows.next();
if (row.canGetString(journalColumnName)) {
String name = row.getString(journalColumnName);
String suggestedName = scimapsJournalMatcher.get(name);
outputTable.setString(rowIndex, standardizedJournalNameColumnIndex, suggestedName);
}
rowIndex++;
}
return outputTable;
}
