public void setGenome(String key, Genome genome) {
if (!genome.getID().equals(key)) {
throw new IllegalStateException();
}
keyedGenomes_.put(genome.getID(), genome);
return;
}
public void install(DBGenome genome, List<Genome> keyedGenomes) {
rootGenome_ = genome;
keyedGenomes_ = new HashMap<String, Genome>();
if (genome != null) {
keyedGenomes_.put(genome.getID(), genome);
}
if (keyedGenomes != null) {
int numkg = keyedGenomes.size();
for (int i = 0; i < numkg; i++) {
Genome keyedGenome = keyedGenomes.get(i);
keyedGenomes_.put(keyedGenome.getID(), keyedGenome);
}
}
Iterator<Genome> vals = this.keyedGenomes_.values().iterator();
while (vals.hasNext()) {
AbstractGenome keyedCopy = (AbstractGenome) vals.next();
keyedCopy.setGenomeSource(this);
}
return;
}
public void setGenome(Genome genome) {
rootGenome_ = (DBGenome) genome;
keyedGenomes_.put(genome.getID(), genome);
return;
}
