/**
* Update the indexes for this object. This stage tracks the following data:
*
* <ul>
* <li>Processing date (today)
* <li>PatientID
* <li>StudyInstanceUID
* <li>SeriesInstanceUID
* <li>SOPInstanceUID
* </ul>
*
* It creates table entries for the values in this object. IDs which are not unique may be
* overwritten by subsequent objects (e.g. duplicates). Thus, the tables contain only records of
* unique objects that have been processed.
*
* @param fileObject the object to process.
* @return the same FileObject if the result is true; otherwise null.
*/
public FileObject process(FileObject fileObject) {
lastFileIn = new File(fileObject.getFile().getAbsolutePath());
lastTimeIn = System.currentTimeMillis();
try {
if (fileObject instanceof DicomObject) {
DicomObject dob = (DicomObject) fileObject;
String date = StringUtil.getDate("");
String patientID = dob.getPatientID();
String studyInstanceUID = dob.getStudyInstanceUID();
String seriesInstanceUID = dob.getSeriesInstanceUID();
String sopInstanceUID = dob.getSOPInstanceUID();
index(dateIndex, date, patientID);
index(patientIndex, patientID, studyInstanceUID);
index(studyIndex, studyInstanceUID, seriesInstanceUID);
index(seriesIndex, seriesInstanceUID, sopInstanceUID);
recman.commit();
}
} catch (Exception skip) {
logger.debug("Unable to process " + fileObject.getFile());
}
lastFileOut = new File(fileObject.getFile().getAbsolutePath());
lastTimeOut = System.currentTimeMillis();
return fileObject;
}
/**
* Check a DicomObject and record any failing lookups in the database.
*
* @param fileObject the object to process.
* @return the same FileObject if the result is true; otherwise null.
*/
public FileObject process(FileObject fileObject) {
String cmd;
lastFileIn = new File(fileObject.getFile().getAbsolutePath());
lastTimeIn = System.currentTimeMillis();
if (fileObject instanceof DicomObject) {
DicomObject dob = (DicomObject) fileObject;
if (dcmScriptFile != null) {
DAScript daScript = DAScript.getInstance(dcmScriptFile);
scriptTable = new ScriptTable(daScript);
lutProps = LookupTable.getProperties(lutFile);
synchronized (this) {
Dataset ds = dob.getDataset();
charset = ds.getSpecificCharacterSet();
boolean ok = checkDataset(ds);
if (!ok) {
try {
recman.commit();
} catch (Exception unable) {
}
;
if (quarantine != null) quarantine.insert(fileObject);
return null;
}
}
}
}
lastFileOut = new File(fileObject.getFile().getAbsolutePath());
lastTimeOut = System.currentTimeMillis();
return fileObject;
}