protected ArticleFiles processUrl(CachedUrl cu, Matcher mat) { ArticleFiles af = new ArticleFiles(); af.setFullTextCu(cu); af.setRoleCu(ArticleFiles.ROLE_ABSTRACT, cu); // XXX Full text PDF link embedded in page, cannot guess URL return af; }
public void testFunctionalFromTarHierarchy() throws Exception { log.debug3("in testFromTarHierarchy"); // load the tarballs InputStream file_input = null; try { file_input = getResourceAsStream(realTARFile_A); // UrlCacher uc = au.makeUrlCacher(TAR_A_BASE); // uc.storeContent(file_input, tarHeader); UrlCacher uc = tarAu.makeUrlCacher(new UrlData(file_input, tarHeader, TAR_A_BASE)); uc.storeContent(); IOUtil.safeClose(file_input); file_input = getResourceAsStream(realTARFile_B); // uc = au.makeUrlCacher(TAR_B_BASE); // uc.storeContent(file_input, tarHeader); uc = tarAu.makeUrlCacher(new UrlData(file_input, tarHeader, TAR_B_BASE)); uc.storeContent(); IOUtil.safeClose(file_input); } catch (IOException e) { // TODO Auto-generated catch block e.printStackTrace(); } finally { IOUtil.safeClose(file_input); } CachedUrlSet cus = tarAu.getAuCachedUrlSet(); for (CachedUrl cu : cus.getCuIterable()) { log.debug3("AU - cu is: " + cu.getUrl()); cu.release(); } // We need to start from the level of the ArticleMetadataExtractor MyListEmitter emitter = new MyListEmitter(); ArticleMetadataExtractor amEx = new ElsevierDeferredArticleMetadataExtractor(ArticleFiles.ROLE_ARTICLE_METADATA); Iterator<ArticleFiles> it = tarAu.getArticleIterator(MetadataTarget.Any()); while (it.hasNext()) { ArticleFiles af = it.next(); log.debug3("Metadata test - articlefiles " + af.toString()); // CachedUrl cu = af.getFullTextCu(); CachedUrl cu = af.getRoleCu(ArticleFiles.ROLE_ARTICLE_METADATA); log.debug3("metadata cu is " + cu.getUrl()); // List<ArticleMetadata> mdlist = mle.extract(MetadataTarget.Any(), cu); amEx.extract(MetadataTarget.Any(), af, emitter); List<ArticleMetadata> returnList = emitter.getAmList(); assertNotNull(returnList); log.debug3("size of returnList is " + returnList.size()); Iterator<ArticleMetadata> mdIt = returnList.iterator(); ArticleMetadata mdRecord = null; while (mdIt.hasNext()) { mdRecord = (ArticleMetadata) mdIt.next(); validateCompleteMetadataRecord(mdRecord); } } }
public void testArticleCountAndType() throws Exception { int expCount = 28; PluginTestUtil.crawlSimAu(sau); String pat1 = "branch(\\d+)/(\\d+file\\.html)"; String rep1 = "aps/journal/v123/n$1/full/$2"; PluginTestUtil.copyAu(sau, nau, ".*[^.][^p][^d][^f]$", pat1, rep1); String pat2 = "branch(\\d+)/(\\d+file\\.pdf)"; String rep2 = "aps/journal/v123/n$1/pdf/$2"; PluginTestUtil.copyAu(sau, nau, ".*\\.pdf$", pat2, rep2); // Remove some URLs int deleted = 0; for (Iterator it = nau.getAuCachedUrlSet().contentHashIterator(); it.hasNext(); ) { CachedUrlSetNode cusn = (CachedUrlSetNode) it.next(); if (cusn instanceof CachedUrl) { CachedUrl cu = (CachedUrl) cusn; String url = cu.getUrl(); if (url.contains("/journal/") && (url.endsWith("1file.html") || url.endsWith("2file.pdf"))) { deleteBlock(cu); ++deleted; } } } assertEquals(8, deleted); Iterator<ArticleFiles> it = nau.getArticleIterator(); int count = 0; int countHtmlOnly = 0; int countPdfOnly = 0; while (it.hasNext()) { ArticleFiles af = it.next(); log.info(af.toString()); CachedUrl cu = af.getFullTextCu(); String url = cu.getUrl(); assertNotNull(cu); String contentType = cu.getContentType(); log.debug("count " + count + " url " + url + " " + contentType); count++; if (af.getRoleUrl(ArticleFiles.ROLE_FULL_TEXT_PDF) == null) { ++countHtmlOnly; } if (af.getRoleUrl(ArticleFiles.ROLE_FULL_TEXT_PDF) == url) { ++countPdfOnly; } } log.debug("Article count is " + count); assertEquals(expCount, count); assertEquals(4, countHtmlOnly); assertEquals(4, countPdfOnly); }
public void testCreateArticleFiles() throws Exception { PluginTestUtil.crawlSimAu(sau); String pat0 = "001file[.]html"; String rep0 = "52/1/S1"; PluginTestUtil.copyAu(sau, au, ".*[.]html$", pat0, rep0); String pat1 = "001file[.]pdf"; String rep1 = "52/1/S1.pdf"; PluginTestUtil.copyAu(sau, au, ".*[.]pdf$", pat1, rep1); String pdfurl = "http://pediatrics.aappublications.org/cgi/reprint/52/1/S1.pdf"; String url = "http://pediatrics.aappublications.org/cgi/reprint/52/1/S1"; au.makeCachedUrl(url); CachedUrl cu = au.makeCachedUrl(pdfurl); assertNotNull(cu); SubTreeArticleIterator artIter = createSubTreeIter(); assertNotNull(artIter); ArticleFiles af = artIter.next(); assertNotNull(af); System.out.println("article files::" + af); assertEquals(url, af.getRoleCu(ArticleFiles.ROLE_FULL_TEXT_PDF_LANDING_PAGE).getUrl()); assertEquals(pdfurl, af.getRoleCu(ArticleFiles.ROLE_FULL_TEXT_PDF).getUrl()); }