private void gen(ResourceDefn rd) throws Exception {
Section section = section(rd.getName());
ElementDefn t = rd.getRoot();
if (t.getTypes().isEmpty()) section.triple("fhir:" + t.getName(), "a", "rdfs:Class");
else section.triple("fhir:" + t.getName(), "rdfs:subClassOf", processType(t.typeCode()));
section.comment("fhir:" + t.getName(), rd.getDefinition());
if (!Utilities.noString(t.getW5()))
section.triple(
"fhir:" + t.getName(), "fhir:w5", complex().predicate("a", "fhir:w5\\#" + t.getW5()));
processMappings(section, "fhir:" + rd.getName(), rd.getRoot());
for (ElementDefn e : t.getElements()) {
if (e.getName().endsWith("[x]")) {
String cn = e.getName().substring(0, e.getName().length() - 3);
section.triple("fhir:" + t.getName() + "." + cn, "a", "rdf:Property");
section.comment("fhir:" + t.getName() + "." + cn, e.getDefinition());
processMappings(section, "fhir:" + t.getName() + "." + cn, e);
for (TypeRef tr : e.typeCode().equals("*") ? getAnyTypes() : e.getTypes()) {
String en = cn + Utilities.capitalize(tr.getName());
section.triple(
"fhir:" + t.getName() + "." + en,
"rdfs:subPropertyOf",
"fhir:" + t.getName() + "." + cn);
section.triple("fhir:" + t.getName() + "." + en, "rdfs:domain", "fhir:" + rd.getName());
genRange(section, t.getName(), en, e, tr, false);
}
} else {
section.triple("fhir:" + t.getName() + "." + e.getName(), "a", "rdf:Property");
section.comment("fhir:" + t.getName() + "." + e.getName(), e.getDefinition());
section.triple(
"fhir:" + t.getName() + "." + e.getName(), "rdfs:domain", "fhir:" + rd.getName());
processMappings(section, "fhir:" + t.getName() + "." + e.getName(), e);
genRange(
section,
t.getName(),
e.getName(),
e,
e.getTypes().isEmpty() ? null : e.getTypes().get(0),
false);
}
}
processAnonTypes();
}
private ResourceDefn loadResource(String n, Map<String, ResourceDefn> map, boolean sandbox)
throws Exception {
String src = sandbox ? sndBoxDir : srcDir;
File spreadsheet =
new CSFile(
(sandbox ? sndBoxDir : srcDir) + n + File.separatorChar + n + "-spreadsheet.xml");
if (!spreadsheet.exists())
spreadsheet =
new CSFile((sandbox ? sndBoxDir : srcDir) + n + File.separatorChar + n + "-def.xml");
SpreadsheetParser sparser =
new SpreadsheetParser(
new CSFileInputStream(spreadsheet),
spreadsheet.getName(),
definitions,
src,
logger,
registry);
ResourceDefn root;
try {
root = sparser.parseResource();
} catch (Exception e) {
throw new Exception("Error Parsing Resource " + n + ": " + e.getMessage(), e);
}
root.setSandbox(sandbox);
for (EventDefn e : sparser.getEvents()) processEvent(e, root.getRoot());
// EK: Commented this out, seems double with next statement, since
// loadResource()
// is always called with definitions.getResources in its map argument.
// definitions.getResources().put(root.getName(), root);
if (map != null) {
map.put(root.getName(), root);
definitions
.getKnownResources()
.put(root.getName(), new DefinedCode(root.getName(), root.getRoot().getDefinition(), n));
}
root.setStatus(ini.getStringProperty("status", n));
return root;
}
protected ElementDefn getRootDefinition() {
ElementDefn el = null;
ResourceDefn resource = definitions.getResources().get(name);
resource = (resource == null) ? definitions.getBaseResources().get(name) : resource;
if (resource != null) {
el = resource.getRoot();
} else {
el = definitions.getInfrastructure().get(name);
el = (el == null) ? definitions.getTypes().get(name) : el;
el = (el == null) ? definitions.getStructures().get(name) : el;
}
return el;
}
