예제 #1
0
 /** @ejb.interface-method */
 public void setAttributes(Dataset ds) {
   setPpsStartDateTime(ds.getDateTime(Tags.PPSStartDate, Tags.PPSStartTime));
   setPpsStatus(ds.getString(Tags.GPPPSStatus));
   AttributeFilter filter = AttributeFilter.getExcludePatientAttributeFilter();
   byte[] b = DatasetUtils.toByteArray(filter.filter(ds), filter.getTransferSyntaxUID());
   if (log.isDebugEnabled()) {
     log.debug("setEncodedAttributes(byte[" + b.length + "])");
   }
   setEncodedAttributes(b);
 }
예제 #2
0
  public void addWorklistItem(
      Long studyPk, String templateFile, String humanPerformerCode, Long scheduleDate)
      throws Exception {
    String uri =
        FileUtils.resolve(new File(templatePath, templateFile + ".xml")).toURI().toString();
    if (log.isDebugEnabled()) log.debug("load template file: " + uri);
    Dataset ds = DatasetUtils.fromXML(new InputSource(uri));

    ContentManager cm = getContentManager();
    // patient
    Dataset patDS = cm.getPatientForStudy(studyPk.longValue());
    if (log.isDebugEnabled()) {
      log.debug("Patient Dataset:");
      log.debug(patDS);
    }

    ds.putAll(patDS.subSet(PAT_ATTR_TAGS));
    //
    Dataset sopInstRef = cm.getSOPInstanceRefMacro(studyPk.longValue(), false);
    String studyIUID = sopInstRef.getString(Tags.StudyInstanceUID);
    ds.putUI(Tags.SOPInstanceUID, UIDGenerator.getInstance().createUID());
    ds.putUI(Tags.StudyInstanceUID, studyIUID);
    DcmElement inSq = ds.putSQ(Tags.InputInformationSeq);
    inSq.addItem(sopInstRef);

    // Scheduled Human Performer Seq
    DcmElement schedHPSq = ds.putSQ(Tags.ScheduledHumanPerformersSeq);
    Dataset item = schedHPSq.addNewItem();
    DcmElement hpCodeSq = item.putSQ(Tags.HumanPerformerCodeSeq);
    Dataset dsCode = (Dataset) this.humanPerformer.get(humanPerformerCode);
    log.info(dsCode);
    if (dsCode != null) {
      hpCodeSq.addItem(dsCode);
      item.putPN(Tags.HumanPerformerName, dsCode.getString(Tags.CodeMeaning));
    }

    // Scheduled Procedure Step Start Date and Time
    ds.putDT(Tags.SPSStartDateAndTime, new Date(scheduleDate.longValue()));

    if (log.isDebugEnabled()) {
      log.debug("GPSPS Dataset:");
      log.debug(ds);
    }

    addWorklistItem(ds);
  }
예제 #3
0
 /** @ejb.interface-method */
 public Dataset getAttributes() {
   return DatasetUtils.fromByteArray(getEncodedAttributes());
 }
예제 #4
0
  private void sendMwlItem() throws CreateException, FinderException, Exception {

    String id = "123";

    String PatientId = "PATID-" + id;
    String PatientName = "Ivanov-" + id + "^I^I";
    String PatientBirthDate = "19740301";
    String PatientSex = "M";

    String AdmissionID = "ADMID-" + id;
    String ScheduledProcedureStepID = "SPSID-" + id;
    String RequestedProcedureID = "RPID-" + id;

    // TODO Auto-generated method stub
    File fXmlFile = new File("./test/dicom/mwlitem.xml");
    DocumentBuilderFactory dbFactory = DocumentBuilderFactory.newInstance();
    DocumentBuilder dBuilder = dbFactory.newDocumentBuilder();
    Document doc = dBuilder.parse(fXmlFile);

    // optional, but recommended
    // read this -
    // http://stackoverflow.com/questions/13786607/normalization-in-dom-parsing-with-java-how-does-it-work
    doc.getDocumentElement().normalize();

    System.out.println("Root element :" + doc.getDocumentElement().getNodeName());

    NodeList nList = doc.getElementsByTagName("attr");

    for (int i = 0; i < nList.getLength(); i++) {
      Node attrNode = nList.item(i);

      // PatientId
      if (((Element) (attrNode)).getAttribute("tag").equals("00100020")) {
        attrNode.getFirstChild().setNodeValue(PatientId);
        System.out.println("PatientId " + attrNode.getFirstChild().getNodeValue());
      }

      // PatientName
      if (((Element) (attrNode)).getAttribute("tag").equals("00100010")) {
        attrNode.getFirstChild().setNodeValue(PatientName);
        System.out.println("PatientName " + attrNode.getFirstChild().getNodeValue());
      }

      // PatientBirthDate
      if (((Element) (attrNode)).getAttribute("tag").equals("00100030")) {
        attrNode.getFirstChild().setNodeValue(PatientBirthDate);
        System.out.println("PatientBirthDate " + attrNode.getFirstChild().getNodeValue());
      }

      // PatientSex
      if (((Element) (attrNode)).getAttribute("tag").equals("00100040")) {
        attrNode.getFirstChild().setNodeValue(PatientSex);
        System.out.println("PatientSex " + attrNode.getFirstChild().getNodeValue());
      }

      // AdmissionID
      if (((Element) (attrNode)).getAttribute("tag").equals("00380010")) {
        attrNode.getFirstChild().setNodeValue(AdmissionID);
        System.out.println("AdmissionID " + attrNode.getFirstChild().getNodeValue());
      }

      // Scheduled Procedure Step Sequence
      if (((Element) (attrNode)).getAttribute("tag").equals("00400100")) {

        NodeList itemList = attrNode.getChildNodes();

        for (int j = 0; j < itemList.getLength(); j++) {
          Node itemNode = itemList.item(j);

          if (itemNode.getNodeType() == Node.ELEMENT_NODE) {

            NodeList tagList = ((Element) itemNode).getElementsByTagName("attr");
            for (int k = 0; k < tagList.getLength(); k++) {

              Node itemNode2 = tagList.item(k);
              // ScheduledProcedureStepID
              if (((Element) (itemNode2)).getAttribute("tag").equals("00400009")) {
                itemNode2.getFirstChild().setNodeValue(ScheduledProcedureStepID);
                System.out.println(
                    "ScheduledProcedureStepID " + itemNode2.getFirstChild().getNodeValue());
              }
            }
          }
        }
      }

      // RequestedProcedureID
      if (((Element) (attrNode)).getAttribute("tag").equals("00401001")) {
        attrNode.getFirstChild().setNodeValue(RequestedProcedureID);
        System.out.println("RequestedProcedureID " + attrNode.getFirstChild().getNodeValue());
      }
    }

    TransformerFactory tf = TransformerFactory.newInstance();
    Transformer transformer = tf.newTransformer();
    transformer.setOutputProperty(OutputKeys.OMIT_XML_DECLARATION, "yes");
    StringWriter writer = new StringWriter();
    transformer.transform(new DOMSource(doc), new StreamResult(writer));
    String output = writer.getBuffer().toString().replaceAll("\n|\r", "");

    //		System.out.println("!! "+output);
    Dataset ds = DatasetUtils.fromXML(output);

    ds = add(ds);
    Dataset spsitem = ds.getItem(Tags.SPSSeq);
    System.out.println(
        ds.getString(Tags.RequestedProcedureID) + '/' + spsitem.getString(Tags.SPSID));
  }