/** {@inheritDoc} */
@Override
public void onMatching(
String docUri, Type type, SortedSet<Annotation> goldAnnos, SortedSet<Annotation> sysAnnos) {
if (goldAnnos.size() == 1 && sysAnnos.size() == 1) {
Annotation goldAnno = goldAnnos.iterator().next();
Annotation sysAnno = sysAnnos.iterator().next();
if (goldAnno.getBegin() == sysAnno.getBegin() && goldAnno.getEnd() == sysAnno.getEnd()) {
printRow(
type.getShortName(),
"Exact",
goldAnno.getCoveredText(),
String.valueOf(goldAnno.getBegin()),
sysAnno.getCoveredText(),
String.valueOf(sysAnno.getBegin()),
docUri);
return;
}
}
printRow(
type.getShortName(),
"Partial",
Joiner.on(" /// ").join(transform(goldAnnos, annoToTxt)),
Joiner.on(", ").join(transform(goldAnnos, annoToOffset)),
Joiner.on(" /// ").join(transform(sysAnnos, annoToTxt)),
Joiner.on(", ").join(transform(sysAnnos, annoToOffset)),
docUri);
}
@Override
public void process(JCas cas) throws AnalysisEngineProcessException {
this.setSource(cas);
this.setTarget(cas);
AnnotationIndex<Annotation> index = cas.getAnnotationIndex(this.getSourceType());
FSIterator<Annotation> iter = index.iterator();
while (iter.hasNext()) {
Annotation annotation = iter.next();
String source = null;
if (this.getSourceFeature() == null) {
source = annotation.getCoveredText();
} else {
source = annotation.getStringValue(this.getSourceFeature());
}
if (source != null) {
String target = this.getMapping().get(source);
if (target != null) {
if (this.update().booleanValue()) {
this.update(cas, annotation, this.getTargetFeature(), target);
} else {
this.create(
cas, this.getTargetFeature(), annotation.getBegin(), annotation.getEnd(), target);
}
}
}
}
}
/** {@inheritDoc} */
@Override
public void onSpurious(String docUri, Type type, Annotation sysAnno) {
printRow(
type.getShortName(),
"Spurious",
null,
null,
sysAnno.getCoveredText(),
String.valueOf(sysAnno.getBegin()),
docUri);
}
/** {@inheritDoc} */
@Override
public void onMissing(String docUri, Type type, Annotation goldAnno) {
printRow(
type.getShortName(),
"Missing",
goldAnno.getCoveredText(),
String.valueOf(goldAnno.getBegin()),
null,
null,
docUri);
}
@Override
public void process(JCas jCas) throws AnalysisEngineProcessException {
if (windowClass != null) {
for (Annotation window : JCasUtil.select(jCas, windowClass)) {
String text = window.getCoveredText();
createParentheticals(jCas, text, window.getBegin());
}
} else {
String text = jCas.getDocumentText();
createParentheticals(jCas, text, 0);
}
}
@Override
public void process(JCas jcas) throws AnalysisEngineProcessException {
Type type = jcas.getCas().getTypeSystem().getType(TYPE_NAME);
Feature entityFeature = type.getFeatureByBaseName(ENTITY_FEATURE);
Feature nameFeature = type.getFeatureByBaseName(NAME_FEATURE);
for (Annotation annotation : jcas.getAnnotationIndex(TokenAnnotation.type)) {
String tokenPOS = ((TokenAnnotation) annotation).getPosTag();
if (NP.equals(tokenPOS) || NPS.equals(tokenPOS)) {
AnnotationFS entityAnnotation =
jcas.getCas().createAnnotation(type, annotation.getBegin(), annotation.getEnd());
entityAnnotation.setStringValue(entityFeature, annotation.getCoveredText());
String name =
"OTHER"; // "OTHER" makes no sense. In practice, "PERSON", "COUNTRY", "E-MAIL", etc.
if (annotation.getCoveredText().equals("Apache")) name = "ORGANIZATION";
entityAnnotation.setStringValue(nameFeature, name);
jcas.addFsToIndexes(entityAnnotation);
}
}
}
@Override
public String apply(Annotation input) {
return input.getCoveredText();
}
/**
* Echo in the standard output (the console) the type and the covered text of the given annotation
*
* @param anAnnotation
*/
public static void echo(Annotation anAnnotation) {
System.out.printf(
"type>%s<\t\tcoveredText>%s<\n",
anAnnotation.getClass().getSimpleName(), anAnnotation.getCoveredText());
}