private VectorContainer getBatch() throws IOException {
assert fs != null;
assert path != null;
if (inputStream == null) {
inputStream = fs.open(path);
}
VectorAccessibleSerializable vas = new VectorAccessibleSerializable(allocator);
Stopwatch watch = Stopwatch.createStarted();
vas.readFromStream(inputStream);
VectorContainer c = vas.get();
if (schema != null) {
c = SchemaUtil.coerceContainer(c, schema, context);
}
// logger.debug("Took {} us to read {} records", watch.elapsed(TimeUnit.MICROSECONDS),
// c.getRecordCount());
spilledBatches--;
currentContainer.zeroVectors();
Iterator<VectorWrapper<?>> wrapperIterator = c.iterator();
for (VectorWrapper w : currentContainer) {
TransferPair pair =
wrapperIterator.next().getValueVector().makeTransferPair(w.getValueVector());
pair.transfer();
}
currentContainer.setRecordCount(c.getRecordCount());
c.zeroVectors();
return c;
}
@Override
public IterOutcome innerNext() {
if (schema != null) {
if (spillCount == 0) {
return (getSelectionVector4().next()) ? IterOutcome.OK : IterOutcome.NONE;
} else {
Stopwatch w = Stopwatch.createStarted();
int count = copier.next(targetRecordCount);
if (count > 0) {
long t = w.elapsed(TimeUnit.MICROSECONDS);
logger.debug("Took {} us to merge {} records", t, count);
container.setRecordCount(count);
return IterOutcome.OK;
} else {
logger.debug("copier returned 0 records");
return IterOutcome.NONE;
}
}
}
int totalCount = 0;
int totalBatches = 0; // total number of batches received so far
try {
container.clear();
outer:
while (true) {
IterOutcome upstream;
if (first) {
upstream = IterOutcome.OK_NEW_SCHEMA;
} else {
upstream = next(incoming);
}
if (upstream == IterOutcome.OK && sorter == null) {
upstream = IterOutcome.OK_NEW_SCHEMA;
}
switch (upstream) {
case NONE:
if (first) {
return upstream;
}
break outer;
case NOT_YET:
throw new UnsupportedOperationException();
case STOP:
return upstream;
case OK_NEW_SCHEMA:
case OK:
VectorContainer convertedBatch;
// only change in the case that the schema truly changes. Artificial schema changes are
// ignored.
if (upstream == IterOutcome.OK_NEW_SCHEMA && !incoming.getSchema().equals(schema)) {
if (schema != null) {
if (unionTypeEnabled) {
this.schema = SchemaUtil.mergeSchemas(schema, incoming.getSchema());
} else {
throw new SchemaChangeException(
"Schema changes not supported in External Sort. Please enable Union type");
}
} else {
schema = incoming.getSchema();
}
convertedBatch = SchemaUtil.coerceContainer(incoming, schema, oContext);
for (BatchGroup b : batchGroups) {
b.setSchema(schema);
}
for (BatchGroup b : spilledBatchGroups) {
b.setSchema(schema);
}
this.sorter = createNewSorter(context, convertedBatch);
} else {
convertedBatch = SchemaUtil.coerceContainer(incoming, schema, oContext);
}
if (first) {
first = false;
}
if (convertedBatch.getRecordCount() == 0) {
for (VectorWrapper<?> w : convertedBatch) {
w.clear();
}
break;
}
SelectionVector2 sv2;
if (incoming.getSchema().getSelectionVectorMode()
== BatchSchema.SelectionVectorMode.TWO_BYTE) {
sv2 = incoming.getSelectionVector2().clone();
} else {
try {
sv2 = newSV2();
} catch (InterruptedException e) {
return IterOutcome.STOP;
} catch (OutOfMemoryException e) {
throw new OutOfMemoryException(e);
}
}
int count = sv2.getCount();
totalCount += count;
totalBatches++;
sorter.setup(context, sv2, convertedBatch);
sorter.sort(sv2);
RecordBatchData rbd = new RecordBatchData(convertedBatch, oAllocator);
boolean success = false;
try {
rbd.setSv2(sv2);
batchGroups.add(new BatchGroup(rbd.getContainer(), rbd.getSv2(), oContext));
if (peakNumBatches < batchGroups.size()) {
peakNumBatches = batchGroups.size();
stats.setLongStat(Metric.PEAK_BATCHES_IN_MEMORY, peakNumBatches);
}
batchesSinceLastSpill++;
if ( // If we haven't spilled so far, do we have enough memory for MSorter if this
// turns out to be the last incoming batch?
(spillCount == 0 && !hasMemoryForInMemorySort(totalCount))
||
// If we haven't spilled so far, make sure we don't exceed the maximum number of
// batches SV4 can address
(spillCount == 0 && totalBatches > Character.MAX_VALUE)
||
// TODO(DRILL-4438) - consider setting this threshold more intelligently,
// lowering caused a failing low memory condition (test in
// BasicPhysicalOpUnitTest)
// to complete successfully (although it caused perf decrease as there was more
// spilling)
// current memory used is more than 95% of memory usage limit of this operator
(oAllocator.getAllocatedMemory() > .95 * oAllocator.getLimit())
||
// Number of incoming batches (BatchGroups) exceed the limit and number of
// incoming batches accumulated
// since the last spill exceed the defined limit
(batchGroups.size() > SPILL_THRESHOLD
&& batchesSinceLastSpill >= SPILL_BATCH_GROUP_SIZE)) {
if (firstSpillBatchCount == 0) {
firstSpillBatchCount = batchGroups.size();
}
if (spilledBatchGroups.size() > firstSpillBatchCount / 2) {
logger.info("Merging spills");
final BatchGroup merged = mergeAndSpill(spilledBatchGroups);
if (merged != null) {
spilledBatchGroups.addFirst(merged);
}
}
final BatchGroup merged = mergeAndSpill(batchGroups);
if (merged != null) { // make sure we don't add null to spilledBatchGroups
spilledBatchGroups.add(merged);
batchesSinceLastSpill = 0;
}
}
success = true;
} finally {
if (!success) {
rbd.clear();
}
}
break;
case OUT_OF_MEMORY:
logger.debug("received OUT_OF_MEMORY, trying to spill");
if (batchesSinceLastSpill > 2) {
final BatchGroup merged = mergeAndSpill(batchGroups);
if (merged != null) {
spilledBatchGroups.add(merged);
batchesSinceLastSpill = 0;
}
} else {
logger.debug("not enough batches to spill, sending OUT_OF_MEMORY downstream");
return IterOutcome.OUT_OF_MEMORY;
}
break;
default:
throw new UnsupportedOperationException();
}
}
if (totalCount == 0) {
return IterOutcome.NONE;
}
if (spillCount == 0) {
if (builder != null) {
builder.clear();
builder.close();
}
builder = new SortRecordBatchBuilder(oAllocator);
for (BatchGroup group : batchGroups) {
RecordBatchData rbd = new RecordBatchData(group.getContainer(), oAllocator);
rbd.setSv2(group.getSv2());
builder.add(rbd);
}
builder.build(context, container);
sv4 = builder.getSv4();
mSorter = createNewMSorter();
mSorter.setup(context, oAllocator, getSelectionVector4(), this.container);
// For testing memory-leak purpose, inject exception after mSorter finishes setup
injector.injectUnchecked(context.getExecutionControls(), INTERRUPTION_AFTER_SETUP);
mSorter.sort(this.container);
// sort may have prematurely exited due to should continue returning false.
if (!context.shouldContinue()) {
return IterOutcome.STOP;
}
// For testing memory-leak purpose, inject exception after mSorter finishes sorting
injector.injectUnchecked(context.getExecutionControls(), INTERRUPTION_AFTER_SORT);
sv4 = mSorter.getSV4();
container.buildSchema(SelectionVectorMode.FOUR_BYTE);
} else { // some batches were spilled
final BatchGroup merged = mergeAndSpill(batchGroups);
if (merged != null) {
spilledBatchGroups.add(merged);
}
batchGroups.addAll(spilledBatchGroups);
spilledBatchGroups =
null; // no need to cleanup spilledBatchGroups, all it's batches are in batchGroups now
logger.warn(
"Starting to merge. {} batch groups. Current allocated memory: {}",
batchGroups.size(),
oAllocator.getAllocatedMemory());
VectorContainer hyperBatch = constructHyperBatch(batchGroups);
createCopier(hyperBatch, batchGroups, container, false);
int estimatedRecordSize = 0;
for (VectorWrapper<?> w : batchGroups.get(0)) {
try {
estimatedRecordSize += TypeHelper.getSize(w.getField().getType());
} catch (UnsupportedOperationException e) {
estimatedRecordSize += 50;
}
}
targetRecordCount =
Math.min(MAX_BATCH_SIZE, Math.max(1, COPIER_BATCH_MEM_LIMIT / estimatedRecordSize));
int count = copier.next(targetRecordCount);
container.buildSchema(SelectionVectorMode.NONE);
container.setRecordCount(count);
}
return IterOutcome.OK_NEW_SCHEMA;
} catch (SchemaChangeException ex) {
kill(false);
context.fail(
UserException.unsupportedError(ex)
.message("Sort doesn't currently support sorts with changing schemas")
.build(logger));
return IterOutcome.STOP;
} catch (ClassTransformationException | IOException ex) {
kill(false);
context.fail(ex);
return IterOutcome.STOP;
} catch (UnsupportedOperationException e) {
throw new RuntimeException(e);
}
}
/**
* Updates the schema for this batch group. The current as well as any deserialized batches will
* be coerced to this schema
*
* @param schema
*/
public void setSchema(BatchSchema schema) {
currentContainer = SchemaUtil.coerceContainer(currentContainer, schema, context);
this.schema = schema;
}