private boolean parseAcceptsList(final QueryBuilder qb, final List<IObject> acceptsList) {
qb.where();
scripts.buildQuery(qb);
if (acceptsList != null && acceptsList.size() > 0) {
for (IObject object : acceptsList) {
if (object instanceof Experimenter) {
qb.and("o.details.owner.id = :oid");
qb.param("oid", object.getId().getValue());
} else if (object instanceof ExperimenterGroup) {
qb.and("o.details.group.id = :gid");
qb.param("gid", object.getId().getValue());
} else {
throw new ome.conditions.ValidationException("Unsupported accept-type: " + object);
}
}
return true;
}
return false;
}
protected Long loadLogFile() throws ServerError {
final ImportRequest req = (ImportRequest) handle.getRequest();
final Long fsId = req.activity.getParent().getId().getValue();
final IMetadataPrx metadataService = sf.getMetadataService();
final List<Long> rootIds = Collections.singletonList(fsId);
try {
final Map<Long, List<IObject>> logMap =
metadataService.loadLogFiles(Fileset.class.getName(), rootIds);
final List<IObject> logs = logMap.get(fsId);
if (CollectionUtils.isNotEmpty(logs)) {
for (final IObject log : logs) {
if (log instanceof OriginalFile) {
final Long ofId = log.getId().getValue();
if (ofId != null) {
return ofId;
}
}
}
}
} catch (ServerError e) {
log.debug("failed to load log file", e);
}
return null;
}
/**
* For a given IAnnotated type
*
* @param o
* @param a
*/
public IObject createAnnotationLink(IObject o, Annotation a) throws Exception {
String name;
if (o instanceof Annotation) {
name = "omero.model.AnnotationAnnotationLinkI";
} else {
name = o.getClass().getSimpleName();
name = name.substring(0, name.length() - 1);
name = "omero.model." + name + "AnnotationLinkI";
}
Class<?> linkClass = Class.forName(name);
IObject link = (IObject) linkClass.newInstance();
Method linkMethod = null;
for (Method m : linkClass.getMethods()) {
if ("link".equals(m.getName())) {
linkMethod = m;
break;
}
}
linkMethod.invoke(link, o, a, null); // Last is Ice.Current;
return link;
}