private void initSelectionModel() { this.selectionModel = new NucleotideSelectionModel( rnaSequence3D .getNucleotides() .toArray(new Nucleotide[rnaSequence3D.getNucleotides().size()])); }
/** initialize secondary structure view items */ private void initSecondaryView() { // clear the secondary structure pane on initialization pane2D.getChildren().clear(); if (view2DController.getGraph2d() != null) { pane2D.widthProperty().removeListener(view2DController.getWidthChangeListener()); pane2D.heightProperty().removeListener(view2DController.getHeightChangeListener()); } view2DController.initGraph2d( rnaSequence3D.extractString(), rnaSequence3D.getNucleotides().size(), rnaSequence3D.computeWCBonds(), (int) pane2D.getWidth(), (int) pane2D.getHeight()); listenOnPane2dResize(); view2DController.setScaleBinding(pane2D.widthProperty(), pane2D.heightProperty()); view2DController.getGraph2d().setSelectionModel(selectionModel); pane2D.getChildren().add(view2DController.getGraph2d()); }