/*
* Recover the maximizing variables going back through the
* maximizing bucket_tree; the variables are returned as an array
* of markers (non-explanation variables get INVALID_INDEX).
*/
private int[] backward_maximization() {
int i, j;
int bi = bucket_tree.length - 1;
DiscreteFunction back_df;
Bucket b = bucket_tree[bi];
// If there are no explanation variables in the BayesNet, return null
if (b.backward_pointers == null) return (null);
// Initialize the markers for backward pointers with INVALID_INDEX
int backward_markers[] = new int[bn.number_variables()];
for (i = 0; i < backward_markers.length; i++) backward_markers[i] = BayesNet.INVALID_INDEX;
// Initialize the marker for the last bucket
backward_markers[b.variable.get_index()] = (int) (b.backward_pointers.get_value(0) + 0.5);
// Go backwards through the bucket_tree
for (i = (bi - 1); i >= 0; i--) {
if (!bucket_tree[i].is_explanation()) break;
back_df = bucket_tree[i].backward_pointers;
// Skip null pointers (caused by evidence)
if (back_df == null) continue;
// Special treatment for bucket with only one value,
// since it can be a bucket with only the bucket variable left
if (back_df.number_values() == 1) {
backward_markers[bucket_tree[i].variable.get_index()] = (int) (back_df.get_value(0) + 0.5);
continue;
}
// Process the bucket
j = back_df.get_position_from_indexes(bn.get_probability_variables(), backward_markers);
backward_markers[bucket_tree[i].variable.get_index()] = (int) (back_df.get_value(j) + 0.5);
}
return (backward_markers);
}
/**
* Distribute evidence in the BucketTree.
*
* @return true if successful; false if not.
*/
public boolean distribute() {
int i, j;
boolean mark_non_conditioning[] = new boolean[bn.number_variables()];
// First make sure the BucketTree has been reduced.
if (unnormalized_result == null) reduce();
// Second make sure there is more than one Bucket in the BucketTree.
int last = bucket_tree.length - 1;
if (last < 1) return (true);
// Third, this method is used only if do_produce_clusters is true.
if (do_produce_clusters == false) return (false);
// Fourth, this method is use only if no explanatory variable was max'ed out.
if (backward_pointers != null) return (false);
// Go through the Bucket objects, from bottom to top,
// to compute the new separator and cluster for each bucket.
for (i = (last - 1); i >= 0; i--) { // Start from (last-1); last does not have child.
// Check whether the Bucket has any valid content.
if (bucket_tree[i].cluster == null) break;
// Take the non-conditioning variables in a boolean array.
for (j = 0; j < mark_non_conditioning.length; j++) mark_non_conditioning[j] = true;
// OBS: The following piece of code will actually be less efficient than
// necessary. It will count as "conditioning" any variable in the cluster
// except the bucket variable. This will imply that some variables in the
// separator will be normalized over without need, and the separator will
// be larger than necessary.
// OBS: this code was contributed by Wei Zhou ([email protected]),
// who also detected the problem with the original code.
// if (bucket_tree[i].cluster.number_variables() >
// bucket_tree[i].non_conditioning_variables.size())
for (j = 1; j < bucket_tree[i].cluster.number_variables(); j++) {
mark_non_conditioning[(bucket_tree[i].cluster.get_variables())[j].get_index()] = false;
}
// The following piece of code does the right thing (compared to the
// piece of code above): it selects the
// minimum number of non-conditioning variables. To use this piece
// of code, it will be necessary to create a "normalize" method that
// normalizes with respect to a number of variables at at time.
/*
for (j=0; j<bucket_tree[i].cluster.number_variables(); j++) {
mark_non_conditioning[ (bucket_tree[i].cluster.get_variables())[j].get_index() ] = false;
}
for (Enumeration e = bucket_tree[i].non_conditioning_variables.elements(); e.hasMoreElements(); ) {
ProbabilityVariable pv = (ProbabilityVariable)(e.nextElement());
mark_non_conditioning[pv.get_index() ] = true;
} */
// Update the separator.
bucket_tree[i].separator =
bucket_tree[i].child.cluster.sum_out(
bn.get_probability_variables(), mark_non_conditioning);
// Compute cluster using new separator (note that if separator
// is null, the cluster had all variables already processed).
if (bucket_tree[i].separator != null) {
// OBS: the method here should normalize with respect to more
// than one variable, to allow this algorithm to be more efficient!
bucket_tree[i].cluster.normalize_first();
// Now combine the cluster and the separator.
bucket_tree[i].cluster =
bucket_tree[i].cluster.multiply(
bn.get_probability_variables(), bucket_tree[i].separator);
}
// Mark the Bucket as DISTRIBUTED.
bucket_tree[i].bucket_status = Bucket.DISTRIBUTED;
}
// Indicate success.
return (true);
}