/**
* Run the function and open the graphical interface
*
* @return the ROI data
*/
public JEXData doit() {
if (!auto) {
wrap.start();
} else {
finishIT();
}
return output;
}
AdjustImageHelperFunction(
JEXData imset, JEXEntry entry, TypeName[] outputNames, ParameterSet parameters) {
// Pass the variables
this.imset = imset;
this.params = parameters;
this.entry = entry;
this.outputNames = outputNames;
// //// Get params
auto = Boolean.parseBoolean(params.getValueOfParameter("Automatic"));
oldMin = Double.parseDouble(params.getValueOfParameter("Old Min"));
oldMax = Double.parseDouble(params.getValueOfParameter("Old Max"));
newMin = Double.parseDouble(params.getValueOfParameter("New Min"));
newMax = Double.parseDouble(params.getValueOfParameter("New Max"));
gamma = Double.parseDouble(params.getValueOfParameter("Gamma"));
depth = Integer.parseInt(params.getValueOfParameter("Output Bit Depth"));
TreeMap<DimensionMap, JEXDataSingle> map = imset.getDataMap();
int length = map.size();
images = new String[length];
dimensions = new DimensionMap[length];
int i = 0;
TreeMap<DimensionMap, String> pathMap = ImageReader.readObjectToImagePathTable(imset);
for (DimensionMap dim : pathMap.keySet()) {
String path = pathMap.get(dim);
dimensions[i] = dim;
images[i] = path;
i++;
}
// Prepare the graphics
imagepanel = new ImagePanel(this, "Adjust image");
displayImage(index);
wrap = new GraphicalFunctionWrap(this, params);
wrap.addStep(
0,
"Select roi",
new String[] {"Automatic", "Old Min", "Old Max", "New Min", "New Max", "Output Bit Depth"});
wrap.setInCentralPanel(imagepanel);
wrap.setDisplayLoopPanel(true);
}
public void startIT() {
wrap.displayUntilStep();
}