/**
* Returns the contents of a file as a string
*
* @param file the file to be read
* @return the contents as a string
*/
public static String getContents(final File file) {
StringBuilder contents = new StringBuilder();
BufferedReader input = null;
try {
// XXX TODO Replace with FileUtils
input = new BufferedReader(new FileReader(file));
String line = null;
while ((line = input.readLine()) != null) {
contents.append(line);
contents.append(eol);
}
} catch (FileNotFoundException ex) {
edu.ku.brc.af.core.UsageTracker.incrHandledUsageCount();
edu.ku.brc.exceptions.ExceptionTracker.getInstance().capture(XMLHelper.class, ex);
ex.printStackTrace();
} catch (IOException ex) {
edu.ku.brc.af.core.UsageTracker.incrHandledUsageCount();
edu.ku.brc.exceptions.ExceptionTracker.getInstance().capture(XMLHelper.class, ex);
ex.printStackTrace();
} finally {
try {
if (input != null) {
input.close();
}
} catch (IOException ex) {
edu.ku.brc.af.core.UsageTracker.incrHandledUsageCount();
edu.ku.brc.exceptions.ExceptionTracker.getInstance().capture(XMLHelper.class, ex);
ex.printStackTrace();
}
}
return contents.toString();
}
/* (non-Javadoc)
* @see edu.ku.brc.af.ui.forms.validation.TypeSearchForQueryFactory#getDOMFromResource(java.lang.String, java.lang.String)
*/
public Element getDOMFromResource(final String name, final String localPath) {
SpecifyAppContextMgr acMgr = (SpecifyAppContextMgr) AppContextMgr.getInstance();
DataProviderSessionIFace session = null;
try {
session = DataProviderFactory.getInstance().createSession();
String[] dirs = {SpecifyAppContextMgr.COMMONDIR, SpecifyAppContextMgr.BACKSTOPDIR};
for (String dirName : dirs) {
SpAppResourceDir appResDir = acMgr.getSpAppResourceDirByName(dirName);
if (appResDir != null) {
SpAppResource appRes = appResDir.getResourceByName(name);
if (appRes != null) {
session.close();
session = null;
return AppContextMgr.getInstance().getResourceAsDOM(appRes);
}
}
}
} catch (Exception ex) {
ex.printStackTrace();
edu.ku.brc.af.core.UsageTracker.incrHandledUsageCount();
edu.ku.brc.exceptions.ExceptionTracker.getInstance()
.capture(SpecifyUIFieldFormatterMgr.class, ex);
} finally {
if (session != null) {
session.close();
}
}
return XMLHelper.readDOMFromConfigDir(localPath); // $NON-NLS-1$
}
/** Setup output directory and get template etc. */
protected void createIndexFile() {
String fName = outputDir.getAbsolutePath() + File.separator + "index.html"; // $NON-NLS-1$
try {
File html = new File(fName);
BufferedWriter output = new BufferedWriter(new FileWriter(html));
int inx = mapTemplate.indexOf(contentTag);
String subContent = mapTemplate.substring(0, inx);
output.write(
StringUtils.replace(
subContent,
"<!-- Title -->",
getResourceString("FormDisplayer.FORM_INDEX"))); // $NON-NLS-1$ //$NON-NLS-2$
output.write("<UL>"); // $NON-NLS-1$
Collections.sort(
entries,
new Comparator<Pair<String, File>>() {
public int compare(Pair<String, File> o1, Pair<String, File> o2) {
return o1.first.compareTo(o2.first);
}
});
int cnt = 0;
for (Pair<String, File> p : entries) {
output.write(
"<LI><a href=\""
+ FilenameUtils.getBaseName(p.second.getName())
+ ".html\">"
+ p.first
+ "</a></LI>"); //$NON-NLS-1$ //$NON-NLS-2$ //$NON-NLS-3$
String prvName =
cnt == 0
? null
: FilenameUtils.getBaseName(entries.get(cnt - 1).second.getName())
+ ".html"; //$NON-NLS-1$
String nxtName =
cnt == entries.size() - 1
? null
: FilenameUtils.getBaseName(entries.get(cnt + 1).second.getName())
+ ".html"; //$NON-NLS-1$
writeImageFile(p.first, p.second.getName(), prvName, nxtName);
cnt++;
}
output.write("</UL>"); // $NON-NLS-1$
output.write(mapTemplate.substring(inx + contentTag.length() + 1, mapTemplate.length()));
output.close();
} catch (Exception e) {
edu.ku.brc.af.core.UsageTracker.incrHandledUsageCount();
edu.ku.brc.exceptions.ExceptionTracker.getInstance().capture(FormDisplayer.class, e);
e.printStackTrace();
}
createFormImagesIndexFile();
JOptionPane.showMessageDialog(
getTopWindow(),
String.format(getResourceString("FormDisplayer.OUTPUT"), outputDir.getAbsoluteFile()));
}
/**
* @param fileName
* @param title
*/
protected void createHTMLFile(final String fileName, final String title) {
try {
file = new File(fileName);
pw = new PrintWriter(file);
pw.print(
"<html><head><title>" + title + "</title></head><body>"); // $NON-NLS-1$ //$NON-NLS-2$
} catch (IOException ex) {
edu.ku.brc.af.core.UsageTracker.incrHandledUsageCount();
edu.ku.brc.exceptions.ExceptionTracker.getInstance().capture(FormDisplayer.class, ex);
ex.printStackTrace();
}
}
/*
* (non-Javadoc)
*
* @see javax.swing.SwingWorker#doInBackground()
*/
@Override
public Boolean doInBackground() {
traversalSession = DataProviderFactory.getInstance().createSession();
try {
buildVerificationQueries();
T root = getTreeRoot();
LinkedList<Integer> parentIds = new LinkedList<Integer>();
initProgress();
verifyNodes(root.getTreeId(), root.getNodeNumber(), parentIds);
return true;
} catch (Exception e) {
edu.ku.brc.af.core.UsageTracker.incrHandledUsageCount();
edu.ku.brc.exceptions.ExceptionTracker.getInstance().capture(NodeNumberer.class, e);
return false;
} finally {
traversalSession.close();
}
}
/**
* @param title
* @param fileName
* @param prevName
* @param nxtName
*/
protected void writeImageFile(
final String title, final String fileName, final String prevName, final String nxtName) {
String fName =
outputDir.getAbsolutePath()
+ File.separator
+ FilenameUtils.getBaseName(fileName)
+ ".html"; //$NON-NLS-1$
try {
File html = new File(fName);
BufferedWriter output = new BufferedWriter(new FileWriter(html));
int inx = mapTemplate.indexOf(contentTag);
String subContent = mapTemplate.substring(0, inx);
output.write(StringUtils.replace(subContent, "<!-- Title -->", title)); // $NON-NLS-1$
output.write("<br>"); // $NON-NLS-1$
if (prevName != null) {
output.write("<a href=\"" + prevName + "\">Previous</a>"); // $NON-NLS-1$ //$NON-NLS-2$
} else {
output.write(getResourceString("FormDisplayer.PREV")); // $NON-NLS-1$
}
output.write(" "); // $NON-NLS-1$
if (nxtName != null) {
output.write("<a href=\"" + nxtName + "\">Next</a>"); // $NON-NLS-1$ //$NON-NLS-2$
} else {
output.write(getResourceString("FormDisplayer.NEXT")); // $NON-NLS-1$
}
output.write(
"<center><br><img src=\""
+ fileName
+ "\"><br><br>"
+ title); //$NON-NLS-1$ //$NON-NLS-2$
output.write("</center>"); // $NON-NLS-1$
output.write(mapTemplate.substring(inx + contentTag.length() + 1, mapTemplate.length()));
output.close();
} catch (Exception e) {
edu.ku.brc.af.core.UsageTracker.incrHandledUsageCount();
edu.ku.brc.exceptions.ExceptionTracker.getInstance().capture(FormDisplayer.class, e);
e.printStackTrace();
}
}
/** Create the UI for the panel */
protected void createUI() {
createForm("Preferences", "LoansPrefs");
AppPreferences prefs = AppPreferences.getRemote();
Integer dueInMonths = prefs.getInt(DUEINMONTHS, 6);
String shippingMethod = prefs.get(LoanGiftShipmentBusRules.SHIPMETHOD, null);
Integer shippedByAgentId = prefs.getInt(LoanGiftShipmentBusRules.SHIPPEDBY, null);
FormViewObj fvo = (FormViewObj) form;
ValSpinner dueSpinner = fvo.getCompById("OVERDUETIME");
if (dueSpinner != null) {
dueSpinner.setValue(dueInMonths);
}
ValComboBox shipMeth = fvo.getCompById("SHIPMETH");
if (shipMeth != null) {
shipMeth.setValue(shippingMethod, null);
}
ValComboBoxFromQuery shippedBy = fvo.getCompById("SHIPPEDBY");
if (shippedBy != null && shippedByAgentId != null) {
DataProviderSessionIFace session = null;
try {
session = DataProviderFactory.getInstance().createSession();
Agent agent = session.get(Agent.class, shippedByAgentId);
shippedBy.setValue(agent, null);
} catch (Exception ex) {
edu.ku.brc.af.core.UsageTracker.incrHandledUsageCount();
edu.ku.brc.exceptions.ExceptionTracker.getInstance()
.capture(ValComboBoxFromQuery.class, ex);
ex.printStackTrace();
} finally {
if (session != null) {
session.close();
}
}
}
}
/** Generates an Image for the View. */
protected void generateViewImage(final ViewIFace view) {
Rectangle rect = frame.getContentPane().getBounds();
if (rect.width == 0 || rect.height == 0) {
return;
}
BufferedImage bufImage =
new BufferedImage(
rect.width,
rect.height,
(doPNG ? BufferedImage.TYPE_INT_ARGB : BufferedImage.TYPE_INT_RGB));
Graphics2D g2 = bufImage.createGraphics();
if (!doPNG) {
g2.setColor(Color.WHITE);
g2.fillRect(0, 0, rect.width, rect.height);
}
g2.setRenderingHints(ERDVisualizer.createTextRenderingHints());
frame.getContentPane().paint(g2);
g2.dispose();
String baseFileName =
outputDir.getAbsoluteFile()
+ "/"
+ view.getName()
+ "_"
+ viewInx; //$NON-NLS-1$ //$NON-NLS-2$
File imgFile = new File(baseFileName + (doPNG ? ".png" : ".jpg")); // $NON-NLS-1$ //$NON-NLS-2$
System.out.println(imgFile.getAbsolutePath());
try {
ImageIO.write(bufImage, "PNG", imgFile); // $NON-NLS-1$
entries.add(new Pair<String, File>(view.getName(), imgFile));
} catch (Exception ex) {
edu.ku.brc.af.core.UsageTracker.incrHandledUsageCount();
edu.ku.brc.exceptions.ExceptionTracker.getInstance().capture(FormDisplayer.class, ex);
ex.printStackTrace();
}
}
/**
* Reads in a file of HTML, primarily from the Help directory and fixes up the images to have an
* absolute path. Plus it strip everything before and including the 'body' tag and strips the
* '</body>' to the end.
*
* @param file the html file to be read.
* @return the file as a string
*/
@SuppressWarnings("deprecation") // $NON-NLS-1$
public static String fixUpHTML(final File file) {
String path = FilenameUtils.getFullPath(file.getAbsolutePath());
StringBuilder sb = new StringBuilder();
try {
List<?> lines = FileUtils.readLines(file);
boolean fndBegin = false;
for (Object lineObj : lines) {
String line = (String) lineObj;
if (!fndBegin) {
if (line.indexOf("<body") > -1) // $NON-NLS-1$
{
fndBegin = true;
}
continue;
}
int inx = line.indexOf("<img"); // $NON-NLS-1$
if (inx > -1) {
inx = line.indexOf("src=\"", inx); // $NON-NLS-1$
sb.append(line.substring(0, inx + 5));
File f = new File(path);
sb.append(f.toURL()); // needed for 1.5
sb.append(line.substring(inx + 5, line.length()));
} else {
sb.append(line + "\n"); // $NON-NLS-1$
}
}
} catch (IOException ex) {
edu.ku.brc.af.core.UsageTracker.incrHandledUsageCount();
edu.ku.brc.exceptions.ExceptionTracker.getInstance().capture(XMLHelper.class, ex);
log.error(ex);
}
return sb.toString();
}
/**
* Saves an Discipline level XML document to a Database Resource.
*
* @param resName the name of the resource
* @param xml the XML to be saved.
*/
public void saveResource(final String resName, final String xml) {
// System.out.println("Saved");
// System.out.println(xml);
// System.out.println();
SpecifyAppContextMgr acMgr = (SpecifyAppContextMgr) AppContextMgr.getInstance();
DataProviderSessionIFace session = null;
try {
session = DataProviderFactory.getInstance().createSession();
SpAppResource appRes = null;
SpAppResourceDir commonResDir =
acMgr.getSpAppResourceDirByName(SpecifyAppContextMgr.COMMONDIR);
if (commonResDir != null) {
appRes = commonResDir.getResourceByName(resName);
if (appRes == null) {
SpAppResourceDir backStopResDir =
acMgr.getSpAppResourceDirByName(SpecifyAppContextMgr.BACKSTOPDIR);
appRes = backStopResDir.getResourceByName(resName);
if (appRes != null) {
backStopResDir.getSpAppResources().remove(appRes);
commonResDir.getSpAppResources().add(appRes);
appRes.setSpAppResourceDir(commonResDir);
} else {
// major error
UIRegistry.showError("Major Error");
}
}
if (appRes != null) {
session.close();
session = null;
appRes.setDataAsString(xml);
AppContextMgr.getInstance().saveResource(appRes);
} else {
UIRegistry.showError("Major Error #2");
}
}
/*if (appRes == null)
{
SpAppResource backStopDir = acMgr.getSpAppResourceDirByName(BACKSTOPDIR).getResourceByName(resName);
if (appResDir != null)
{
SpAppResource newAppRes = new SpAppResource();
newAppRes.initialize();
if (diskAppRes != null)
{
newAppRes.setMetaData(diskAppRes.getMetaData());
newAppRes.setDescription(diskAppRes.getDescription());
newAppRes.setFileName(diskAppRes.getFileName());
newAppRes.setMimeType(diskAppRes.getMimeType());
newAppRes.setName(diskAppRes.getName());
newAppRes.setLevel(diskAppRes.getLevel());
} else
{
newAppRes.setName(resName);
newAppRes.setLevel((short)0);
newAppRes.setMimeType("text/xml");
}
Agent agent = AppContextMgr.getInstance().getClassObject(Agent.class);
newAppRes.setCreatedByAgent(agent);
newAppRes.setSpecifyUser(user);
newAppRes.setSpAppResourceDir(appResDir);
appResDir.getSpAppResources().add(newAppRes);
newAppRes.setDataAsString(xml);
session.close();
session = null;
((SpecifyAppContextMgr) AppContextMgr.getInstance()).saveResource(newAppRes);
} else
{
AppContextMgr.getInstance().putResourceAsXML(resName, xml); //$NON-NLS-1$
}
}*/
} catch (Exception ex) {
ex.printStackTrace();
edu.ku.brc.af.core.UsageTracker.incrHandledUsageCount();
edu.ku.brc.exceptions.ExceptionTracker.getInstance()
.capture(SpecifyUIFieldFormatterMgr.class, ex);
} finally {
if (session != null) {
session.close();
}
}
}
protected boolean setup() {
String pathStr =
AppContextMgr.getInstance().getClassObject(Discipline.class) != null
? AppContextMgr.getInstance().getClassObject(Discipline.class).getType()
: ""; //$NON-NLS-1$
pathStr +=
"_"
+ UIHelper.getOSType().toString()
+ "_"
+ (doAll ? "all" : "user"); // $NON-NLS-1$ //$NON-NLS-2$ //$NON-NLS-3$
baseDir = new File(getUserHomeDir() + File.separator + "FormImages"); // $NON-NLS-1$
outputDir = new File(baseDir.getAbsoluteFile() + File.separator + pathStr);
if (!baseDir.exists()) {
if (!baseDir.mkdir()) {
UIRegistry.showError(
String.format(
getResourceString("FormDisplayer.OUTPUT_ERROR"), baseDir.getAbsoluteFile()));
}
}
if (!outputDir.exists()) {
if (!outputDir.mkdir()) {
UIRegistry.showError(
String.format(
getResourceString("FormDisplayer.OUTPUT_ERROR"), outputDir.getAbsoluteFile()));
}
} else {
try {
FileUtils.cleanDirectory(outputDir);
} catch (Exception ex) {
edu.ku.brc.af.core.UsageTracker.incrHandledUsageCount();
edu.ku.brc.exceptions.ExceptionTracker.getInstance().capture(FormDisplayer.class, ex);
ex.printStackTrace();
}
}
String dstDirPath = UIRegistry.getDefaultUserHomeDir() + File.separator + "Specify/site";
try {
File tmplateFile = checkForTemplateFiles(dstDirPath);
mapTemplate = FileUtils.readFileToString(tmplateFile);
mapTemplate =
StringUtils.replace(
mapTemplate,
"Database Schema",
getResourceString("FormDisplayer.FORMS")); // $NON-NLS-1$ //$NON-NLS-2$
} catch (IOException ex) {
ex.printStackTrace();
JOptionPane.showMessageDialog(
null, "You are missing the template that is needed to run this tool.");
return false;
}
if (StringUtils.isEmpty(mapTemplate)) {
System.err.println("The template file is empty!"); // $NON-NLS-1$
}
try {
File srcDir = new File(dstDirPath); // $NON-NLS-1$
for (File f : srcDir.listFiles()) {
if (!f.getName().startsWith(".")) // $NON-NLS-1$
{
File dst =
new File(outputDir.getAbsolutePath() + File.separator + f.getName()); // $NON-NLS-1$
if (!FilenameUtils.getExtension(f.getName()).toLowerCase().equals("html")) // $NON-NLS-1$
{
FileUtils.copyFile(f, dst);
}
dst = new File(baseDir.getAbsolutePath() + File.separator + f.getName()); // $NON-NLS-1$
if (!FilenameUtils.getExtension(f.getName()).toLowerCase().equals("html")) // $NON-NLS-1$
{
FileUtils.copyFile(f, dst);
}
}
}
} catch (Exception ex) {
ex.printStackTrace();
edu.ku.brc.af.core.UsageTracker.incrHandledUsageCount();
edu.ku.brc.exceptions.ExceptionTracker.getInstance().capture(FormDisplayer.class, ex);
ex.printStackTrace();
return false;
}
return true;
}
/** Setup output directory and get template etc. */
protected void createFormImagesIndexFile() {
String fName = baseDir.getAbsolutePath() + File.separator + "index.html"; // $NON-NLS-1$
try {
File html = new File(fName);
BufferedWriter output = new BufferedWriter(new FileWriter(html));
int inx = mapTemplate.indexOf(contentTag);
String subContent = mapTemplate.substring(0, inx);
output.write(
StringUtils.replace(
subContent,
"<!-- Title -->",
getResourceString("FormDisplayer.FORM_INDEX"))); // $NON-NLS-1$ //$NON-NLS-2$
output.write("<UL>\n"); // $NON-NLS-1$
List<File> files = new Vector<File>();
for (File f : baseDir.listFiles()) {
String nm = f.getName();
if (nm.endsWith("_all") || nm.endsWith("_user")) // $NON-NLS-1$ //$NON-NLS-2$
{
files.add(f);
}
}
Collections.sort(
files,
new Comparator<File>() {
public int compare(File o1, File o2) {
return o1.getName().compareTo(o2.getName());
}
});
String currDiscipline = "";
for (File f : files) {
String[] segments = StringUtils.split(f.getName(), "_"); // $NON-NLS-1$
if (segments != null && segments.length == 3) {
DisciplineType dt = DisciplineType.getDisciplineHash().get(segments[0]);
if (!dt.getName().equals(currDiscipline)) {
if (currDiscipline.length() > 0) output.write("</UL>\n"); // $NON-NLS-1$
output.write("<LI>" + dt.getTitle() + "</LI>\n"); // $NON-NLS-1$ //$NON-NLS-2$
output.write("<UL>\n"); // $NON-NLS-1$
currDiscipline = dt.getName();
}
String title =
String.format(
"%s %s",
segments[1],
(segments[2].equals("all")
? "All"
: "User")); //$NON-NLS-1$ //$NON-NLS-2$ //$NON-NLS-3$
output.write(
"<LI><a href=\""
+ f.getName()
+ File.separator
+ "index.html\">"
+ title
+ "</a></LI>\n"); //$NON-NLS-1$ //$NON-NLS-2$ //$NON-NLS-3$
}
}
output.write("</UL>\n"); // $NON-NLS-1$
output.write("</UL>\n"); // $NON-NLS-1$
output.write(mapTemplate.substring(inx + contentTag.length() + 1, mapTemplate.length()));
output.close();
} catch (Exception e) {
edu.ku.brc.af.core.UsageTracker.incrHandledUsageCount();
edu.ku.brc.exceptions.ExceptionTracker.getInstance().capture(FormDisplayer.class, e);
e.printStackTrace();
}
}