private void applySelectionToNetwork() {
CyNetwork network = Cytoscape.getCurrentNetwork();
network.unselectAllNodes();
network.unselectAllEdges();
Set<String> selection = new HashSet<String>();
for (int i : currentTable.getSelectedRows()) {
selection.add(currentTable.getValueAt(i, 0).toString());
}
NetworkData networkData =
MetScapePlugin.getPluginData().getNetworkData(Networks.getUUID(network));
if (networkData == null) return;
NetworkType networkType = networkData.getNetworkType();
if (networkType == NetworkType.CREG) applySelectionToCREGNetwork(network, selection);
else if (networkType == NetworkType.COMPOUND_REACTION)
applySelectionToCRNetwork(network, selection);
else if (networkType == NetworkType.COMPOUND_GENE)
applySelectionToCGNetwork(network, selection);
else if (networkType == NetworkType.COMPOUND)
applySelectionToCompoundNetwork(network, selection);
CyNetworkView view = Cytoscape.getNetworkView(network.getIdentifier());
if (view != null && initialized) view.redrawGraph(true, true);
else if (!initialized) initialized = true;
}
