private void putAssessment(Request request, Response response, String username) {
try {
NativeDocument doc = NativeDocumentFactory.newNativeDocument();
doc.parse(request.getEntity().getText());
AssessmentParser parser = new AssessmentParser(doc);
AssessmentData assessment = parser.getAssessment();
AssessmentIOWriteResult result = assignIDAndSave(assessment, username);
if (result.status.isSuccess()) {
response.setEntity(assessment.getAssessmentID(), MediaType.TEXT_PLAIN);
response.setStatus(Status.SUCCESS_OK);
} else {
response.setStatus(Status.CLIENT_ERROR_EXPECTATION_FAILED);
}
} catch (RegionConflictException e) {
response.setStatus(Status.CLIENT_ERROR_CONFLICT);
} catch (Exception e) {
response.setStatus(Status.SERVER_ERROR_INTERNAL);
}
}
private void postAssessment(Request request, Response response, String username) {
try {
String entity = request.getEntity().getText();
NativeDocument doc = NativeDocumentFactory.newNativeDocument();
doc.parse(entity);
AssessmentParser parser = new AssessmentParser(doc);
AssessmentData assessment = parser.getAssessment();
VFSPath assessmentUrl = new VFSPath(ServerPaths.getPathForAssessment(assessment, username));
if (vfs.exists(assessmentUrl)) {
Status status =
FileLocker.impl.persistentLockAssessment(
assessment.getAssessmentID(),
BaseAssessment.DRAFT_ASSESSMENT_STATUS,
LockType.SAVE_LOCK,
username);
if (status.isSuccess()) {
AssessmentIOWriteResult result = saveAssessment(assessment, username);
if (result.status.isSuccess()) {
response.setEntity(result.newLastModified + "", MediaType.TEXT_PLAIN);
response.setStatus(status);
} else {
response.setStatus(Status.CLIENT_ERROR_EXPECTATION_FAILED);
}
} else {
response.setStatus(status);
}
}
} catch (RegionConflictException e) {
response.setStatus(Status.CLIENT_ERROR_CONFLICT);
} catch (Exception e) {
e.printStackTrace();
response.setStatus(Status.CLIENT_ERROR_BAD_REQUEST);
}
}
private String batchCreate(Request request, String username) {
NativeDocument doc = NativeDocumentFactory.newNativeDocument();
StringBuffer successfulIDs = new StringBuffer();
StringBuffer extantIDs = new StringBuffer();
StringBuffer unsuccessfulIDs = new StringBuffer();
try {
String text = request.getEntity().getText();
doc.parse(text);
AssessmentFilter filter =
AssessmentFilter.parseXML(
doc.getDocumentElement()
.getElementsByTagName(AssessmentFilter.HEAD_TAG)
.elementAt(0));
NativeNodeList nodes = doc.getDocumentElement().getElementsByTagName("taxon");
boolean useTemplate =
Boolean.parseBoolean(
doc.getDocumentElement()
.getElementsByTagName("useTemplate")
.elementAt(0)
.getTextContent());
System.out.println("Using template? " + useTemplate);
for (int i = 0; i < nodes.getLength(); i++) {
TaxonNode taxon = TaxaIO.readNode(nodes.elementAt(i).getTextContent(), vfs);
AssessmentData curAss = null;
curAss =
doCreateAssessmentForBatch(
request.getChallengeResponse().getIdentifier(), filter, useTemplate, taxon);
try {
AssessmentIOWriteResult result = assignIDAndSave(curAss, username);
if (result.status.isSuccess())
successfulIDs.append(
curAss.getSpeciesName() + (i == nodes.getLength() - 1 ? "" : ", "));
else
unsuccessfulIDs.append(
curAss.getSpeciesName() + (i == nodes.getLength() - 1 ? "" : ", "));
} catch (RegionConflictException e) {
extantIDs.append(curAss.getSpeciesName() + (i == nodes.getLength() - 1 ? "" : ", "));
}
}
StringBuilder ret = new StringBuilder();
if (unsuccessfulIDs.length() > 0)
ret.append(
"<div>Unable to create an assessment for the following species: "
+ unsuccessfulIDs
+ "</div>\r\n");
if (extantIDs.length() > 0)
ret.append(
"<div>The following species already have draft assessments with the specific locality: "
+ extantIDs
+ "</div>\r\n");
if (successfulIDs.length() > 0)
ret.append(
"<div>Successfully created an assessment for the following species: "
+ successfulIDs
+ "</div>\r\n");
return ret.toString();
} catch (IOException e) {
e.printStackTrace();
return null;
} catch (NullPointerException e) {
e.printStackTrace();
return null;
} catch (Exception e) {
e.printStackTrace();
return null;
}
}