public ArrayList<String> getDocNums() {
ArrayList<String> docNums = new ArrayList<String>();
String id;
int i;
try {
String providerId =
msg.getRESPONSE()
.getORDER_OBSERVATION(0)
.getOBR()
.getOrderingProvider(0)
.getIDNumber()
.getValue();
docNums.add(providerId);
i = 0;
while ((id =
msg.getRESPONSE()
.getORDER_OBSERVATION(0)
.getOBR()
.getResultCopiesTo(i)
.getIDNumber()
.getValue())
!= null) {
if (!id.equals(providerId)) docNums.add(id);
i++;
}
} catch (Exception e) {
logger.error("Could not return doctor nums", e);
}
return (docNums);
}
public String getCCDocs() {
String docName = "";
int i = 0;
try {
while (!getFullDocName(
msg.getRESPONSE().getORDER_OBSERVATION(0).getOBR().getResultCopiesTo(i))
.equals("")) {
if (i == 0) {
docName =
getFullDocName(
msg.getRESPONSE().getORDER_OBSERVATION(0).getOBR().getResultCopiesTo(i));
} else {
docName =
docName
+ ", "
+ getFullDocName(
msg.getRESPONSE().getORDER_OBSERVATION(0).getOBR().getResultCopiesTo(i));
}
i++;
}
return (docName);
} catch (Exception e) {
logger.error("Could not return cc'ed doctors", e);
return ("");
}
}
public String getDocName() {
String docName = "";
int i = 0;
try {
while (!getFullDocName(
msg.getRESPONSE().getORDER_OBSERVATION(0).getOBR().getOrderingProvider(i))
.equals("")) {
if (i == 0) {
docName =
getFullDocName(
msg.getRESPONSE().getORDER_OBSERVATION(0).getOBR().getOrderingProvider(i));
} else {
docName =
docName
+ ", "
+ getFullDocName(
msg.getRESPONSE().getORDER_OBSERVATION(0).getOBR().getOrderingProvider(i));
}
i++;
}
return (docName);
} catch (Exception e) {
logger.error("Could not return doctor names", e);
return ("");
}
}
public String getOrderStatus() {
try {
String orderStatus =
getString(
msg.getRESPONSE().getORDER_OBSERVATION(0).getOBR().getResultStatus().getValue());
int obrCount = getOBRCount();
int obxCount;
int count = 0;
for (int i = 0; i < obrCount; i++) {
obxCount = getOBXCount(i);
for (int j = 0; j < obxCount; j++) {
String obxStatus = getOBXResultStatus(i, j);
if (obxStatus.equalsIgnoreCase("C")) count++;
}
}
if (count
>= 1) { // if any of the OBX's have been corrected, mark the entire report as corrected
orderStatus = "C";
return orderStatus;
} else {
return orderStatus;
}
} catch (Exception e) {
return ("");
}
}
/*
* OBC METHODS
*/
public String getAccessionNum() {
try {
String str =
msg.getRESPONSE()
.getORDER_OBSERVATION(0)
.getORC()
.getFillerOrderNumber()
.getEntityIdentifier()
.getValue();
String accessionNum = getString(str);
String[] nums = accessionNum.split("-");
if (nums.length == 3) {
return nums[0];
} else if (nums.length == 5) {
return nums[0] + "-" + nums[1] + "-" + nums[2];
} else {
if (nums.length > 1) return nums[0] + "-" + nums[1];
else return "";
}
} catch (Exception e) {
logger.error("Could not return accession number", e);
return ("");
}
}
/** Retrieve the possible segment headers from the OBX fields */
public ArrayList<String> getHeaders() {
int i;
int arraySize;
int k = 0;
ArrayList<String> headers = new ArrayList<String>();
String currentHeader;
try {
for (i = 0; i < msg.getRESPONSE().getORDER_OBSERVATIONReps(); i++) {
currentHeader = getObservationHeader(i, 0);
arraySize = headers.size();
if (arraySize == 0 || !currentHeader.equals(headers.get(arraySize - 1))) {
logger.info("Adding header: '" + currentHeader + "' to list");
headers.add(currentHeader);
}
}
return (headers);
} catch (Exception e) {
logger.error("Could not create header list", e);
return (null);
}
}
public String getOBRComment(int i, int j) {
try {
return (getString(
msg.getRESPONSE().getORDER_OBSERVATION(i).getNTE(j).getComment(0).getValue()));
} catch (Exception e) {
return ("");
}
}
public String getOBXResult(int i, int j) {
try {
return (getString(
Terser.get(
msg.getRESPONSE().getORDER_OBSERVATION(i).getOBSERVATION(j).getOBX(), 5, 0, 1, 1)));
} catch (Exception e) {
return ("");
}
}
public String getClientRef() {
String docNum = "";
int i = 0;
try {
while (!getString(
msg.getRESPONSE()
.getORDER_OBSERVATION(0)
.getOBR()
.getOrderingProvider(i)
.getIDNumber()
.getValue())
.equals("")) {
if (i == 0) {
docNum =
getString(
msg.getRESPONSE()
.getORDER_OBSERVATION(0)
.getOBR()
.getOrderingProvider(i)
.getIDNumber()
.getValue());
} else {
docNum =
docNum
+ ", "
+ getString(
msg.getRESPONSE()
.getORDER_OBSERVATION(0)
.getOBR()
.getOrderingProvider(i)
.getIDNumber()
.getValue());
}
i++;
}
return (docNum);
} catch (Exception e) {
logger.error("Could not return doctor id numbers", e);
return ("");
}
}
public String getWorkPhone() {
String phone = "";
int i = 0;
try {
while (!getString(
msg.getRESPONSE()
.getPATIENT()
.getPID()
.getPhoneNumberBusiness(i)
.get9999999X99999CAnyText()
.getValue())
.equals("")) {
if (i == 0) {
phone =
getString(
msg.getRESPONSE()
.getPATIENT()
.getPID()
.getPhoneNumberBusiness(i)
.get9999999X99999CAnyText()
.getValue());
} else {
phone =
phone
+ ", "
+ getString(
msg.getRESPONSE()
.getPATIENT()
.getPID()
.getPhoneNumberBusiness(i)
.get9999999X99999CAnyText()
.getValue());
}
i++;
}
return (phone);
} catch (Exception e) {
logger.error("Could not return phone number", e);
return ("");
}
}
public String getObservationHeader(int i, int j) {
try {
return (getString(
msg.getRESPONSE()
.getORDER_OBSERVATION(i)
.getOBR()
.getDiagnosticServiceSectionID()
.getValue()));
} catch (Exception e) {
return ("");
}
}
public String getOBRName(int i) {
try {
return (getString(
msg.getRESPONSE()
.getORDER_OBSERVATION(i)
.getOBR()
.getUniversalServiceIdentifier()
.getText()
.getValue()));
} catch (Exception e) {
return ("");
}
}
public String getOBXResultStatus(int i, int j) {
try {
return (getString(
msg.getRESPONSE()
.getORDER_OBSERVATION(i)
.getOBSERVATION(j)
.getOBX()
.getObservResultStatus()
.getValue()));
} catch (Exception e) {
return ("");
}
}
public String getOBXReferenceRange(int i, int j) {
try {
return (getString(
msg.getRESPONSE()
.getORDER_OBSERVATION(i)
.getOBSERVATION(j)
.getOBX()
.getReferencesRange()
.getValue()));
} catch (Exception e) {
return ("");
}
}
public String getRequestDate(int i) {
try {
return (formatDateTime(
getString(
msg.getRESPONSE()
.getORDER_OBSERVATION(i)
.getOBR()
.getRequestedDateTime()
.getTimeOfAnEvent()
.getValue())));
} catch (Exception e) {
return ("");
}
}
public String getOBXAbnormalFlag(int i, int j) {
try {
return (getString(
msg.getRESPONSE()
.getORDER_OBSERVATION(i)
.getOBSERVATION(j)
.getOBX()
.getAbnormalFlags(0)
.getValue()));
} catch (Exception e) {
logger.error("Error retrieving obx abnormal flag", e);
return ("");
}
}
public String getOBXName(int i, int j) {
try {
return (getString(
msg.getRESPONSE()
.getORDER_OBSERVATION(i)
.getOBSERVATION(j)
.getOBX()
.getObservationIdentifier()
.getText()
.getValue()));
} catch (Exception e) {
return ("");
}
}
/*
* OBX METHODS
*/
public int getOBXCount(int i) {
int count = 0;
try {
count = msg.getRESPONSE().getORDER_OBSERVATION(i).getOBSERVATIONReps();
// if count is 1 there may only be an nte segment and no obx segments so check
if (count == 1) {
String test =
msg.getRESPONSE()
.getORDER_OBSERVATION(i)
.getOBSERVATION(0)
.getOBX()
.getObservationIdentifier()
.getText()
.getValue();
logger.info("name: " + test);
if (test == null) count = 0;
}
} catch (Exception e) {
logger.error("Error retrieving obx count", e);
count = 0;
}
return count;
}
public String getOBXUnits(int i, int j) {
try {
return (getString(
msg.getRESPONSE()
.getORDER_OBSERVATION(i)
.getOBSERVATION(j)
.getOBX()
.getUnits()
.getIdentifier()
.getValue()));
} catch (Exception e) {
return ("");
}
}
public String getServiceDate() {
try {
return (formatDateTime(
getString(
msg.getRESPONSE()
.getORDER_OBSERVATION(0)
.getOBR()
.getObservationDateTime()
.getTimeOfAnEvent()
.getValue())));
// return(formatDateTime(getString(msg.getRESPONSE().getORDER_OBSERVATION(0).getOBR().getObservationDateTime().getTimeOfAnEvent().getValue())));
} catch (Exception e) {
return ("");
}
}
public String getDOB() {
try {
return (formatDateTime(
getString(
msg.getRESPONSE()
.getPATIENT()
.getPID()
.getDateOfBirth()
.getTimeOfAnEvent()
.getValue()))
.substring(0, 10));
} catch (Exception e) {
return ("");
}
}
public String getTimeStamp(int i, int j) {
try {
return (formatDateTime(
getString(
msg.getRESPONSE()
.getORDER_OBSERVATION(i)
.getOBSERVATION(j)
.getOBX()
.getDateTimeOfTheObservation()
.getTimeOfAnEvent()
.getValue())));
} catch (Exception e) {
return ("");
}
}
public String getLastName() {
return (getString(
msg.getRESPONSE().getPATIENT().getPID().getPatientName().getFamilyName().getValue()));
}
public String getFirstName() {
return (getString(
msg.getRESPONSE().getPATIENT().getPID().getPatientName().getGivenName().getValue()));
}
public String getHealthNum() {
return (getString(
msg.getRESPONSE().getPATIENT().getPID().getPatientIDExternalID().getID().getValue()));
}
public int getOBRCount() {
return (msg.getRESPONSE().getORDER_OBSERVATIONReps());
}
public String getSex() {
return (getString(msg.getRESPONSE().getPATIENT().getPID().getSex().getValue()));
}