private SQNode getNodeInfoFromSQ(String nodeId) {
SQNode nodeInfo = null;
ProtocolBuilder mgr = m_studyQueue.getMgr();
VElement velem = mgr.getElement(nodeId);
if (velem != null) {
nodeInfo = new SQNode();
for (String attr : SQNode.getStandardAttributes()) {
String value = mgr.getAttribute(velem, attr);
nodeInfo.setAttr(attr, value);
}
}
// String when = "";
// String[] whenEnums = {"_day", "_night"};
// for (String w : whenEnums) {
// if (psLabel.contains(w)) {
// when = w;
// psLabel = psLabel.replace(w, "");
// }
// if (title.contains(w)) {
// when = w;
// title = title.replace(w, "");
// }
// }
return nodeInfo;
}
/**
* Set properties in studies "prop" file for the given SQ node. A typical location: <br>
* <CODE>
* vnmrsys/studies/exp2/tmpstudy/info/n002/prop
* </CODE>
*
* @param cursqexp Experiment directory for the SQ.
* @param id The ID of the SQ node.
* @param node The node to write about.
*/
private void writePropFile(String cursqexp, String id, SQNode node) {
// The attributes that are written into the "props" file
// (e.g., studies/exp2/tmpstudy/info/n002/prop), in the order
// they should appear. Order is important, because macros
// may read the value of a particular line number without checking
// the key.
// In xmaction it is noted:
// "$id=sqval[1] $type=sqval[2] $status=sqval[3] - fixed position"
// (ID is added to the front of the list after reading the prop file.)
final String[] propAttributes = {
ATTR_TYPE, ATTR_STATUS, ATTR_LOCK, ATTR_TITLE, ATTR_EXP, ATTR_TIME, ATTR_MACRO, ATTR_DATA,
};
String path = cursqexp + "/tmpstudy/info/" + id;
File filePath = new File(path, "/prop");
PrintWriter out = null;
try {
new File(path).mkdirs();
out = new PrintWriter(filePath);
for (String name : propAttributes) {
out.println(name + " " + node.getAttr(name));
}
} catch (FileNotFoundException e) {
Messages.postDebug("Could not write file " + filePath.getPath());
} finally {
try {
out.close();
} catch (Exception e) {
}
}
}
private boolean updateNodeInSQ(String id, SQNode srcNode, List<String> changed) {
boolean ok = false;
ProtocolBuilder mgr = m_studyQueue.getMgr();
VElement elem = mgr.getElement(id);
if (elem != null) {
for (String attr : changed) {
String value = srcNode.getAttr(attr);
mgr.setAttribute(elem, attr, value);
}
ok = true;
}
return ok;
}
public void updateStatsBuildUI(boolean isInitial, SQNodeList nodeList, String cursqexp) {
if (DebugOutput.isSetFor("AllSQUpdater")) {
Messages.postDebug("--------------------- Calc node list:");
SQBuild.printNodeList(nodeList);
Messages.postDebug("--------------------- End calc nodes");
}
// TODO: All of updateStatsBuildUI needs cleaning up.
// Get list of action nodes visible in the SQ
List<String> visibleIds = getNodeIdsFromSQ(ProtocolBuilder.ACTIONS);
String sampleInfoId = removeSampleInfoNode(visibleIds);
if (DebugOutput.isSetFor("AllSQUpdater") && sampleInfoId != null) {
Messages.postDebug("SampleInfo node ignored");
}
if (!isInitial && nodeList.size() != visibleIds.size()) {
Messages.postDebug(
"SQUpdater", "calc nodes: " + nodeList.size() + ", vis nodes: " + visibleIds.size());
Util.sendToVnmr(m_updateCmd);
if (DebugOutput.isSetFor("AllSQUpdater")) {
Messages.postDebug(
visibleIds.size() + " nodes visible in SQ; " + nodeList.size() + " calculated");
// Print out the visibleNodes
Messages.postDebug("--------------------- Visible node list:");
SQNodeList visibleNodes = getNodeInfoFromSQ(visibleIds);
for (SQNode node : visibleNodes) {
Messages.postDebug(node.toString());
}
Messages.postDebug("--------------------- End visible nodes");
}
} else {
// Get all attributes from the visible SQ nodes
// Build list of the visible SQ Nodes
SQNodeList visibleNodes = getNodeInfoFromSQ(visibleIds);
if (DebugOutput.isSetFor("AllSQUpdater")) {
Messages.postDebug("--------------------- Visible node attrs:");
printAllNodeAttributes(visibleIds);
Messages.postDebug("--------------------- End visible attrs");
}
// Find differences between nodeList and SQ
boolean isDiff = false;
if (DebugOutput.isSetFor("AllSQUpdater")) {
Messages.postDebug("--------------------- Node diffs:");
}
for (int i = 0; i < nodeList.size(); i++) {
SQNode node = nodeList.get(i);
SQNode vnode = visibleNodes.get(i);
String diffs = vnode.diff(node);
if (diffs.length() > 0) {
isDiff = true;
if (DebugOutput.isSetFor("AllSQUpdater")) {
Messages.postDebug("Node " + i + " (" + visibleIds.get(i) + ") differs:");
Messages.postDebug(diffs);
}
// // TODO: May not need to check this stuff
// String vstat = vnode.getStatus();
// String cstat = node.getStatus();
// Boolean completed = (cstat.equals(COMPLETED)
// && (vstat.equals(EXECUTING)
// || vstat.equals(ACTIVE)));
// String vtitle = vnode.getTitle().trim();
// // Displayed title may have other stuff after true title
// String[] titleTokens = vtitle.split(" +", 2);
// if (node.getTitle().contains(titleTokens[0]) || completed) {
// Set some SQ node attributes to match calculated node
List<String> changed = vnode.update(node);
if (changed.size() > 0) {
String nodeId = visibleIds.get(i);
updateNodeInSQ(nodeId, vnode, changed);
writePropFile(cursqexp, nodeId, vnode);
}
// }
}
}
if (DebugOutput.isSetFor("AllSQUpdater")) {
Messages.postDebug("--------------------- End node diffs");
}
if (!isDiff) {
if (DebugOutput.isSetFor("SQUpdater")) {
Messages.postDebug("NO DIFFERENCES");
}
// } else {
// m_sqInfoDir = m_curSQExp + "/tmpstudy/info";
}
}
}