/**
* @see RadiologyObsFormController#saveObs(HttpServletRequest, HttpServletResponse, String,
* RadiologyOrder, Obs Obs, BindingResult)
*/
@Test
@Verifies(
value = "should edit obs with edit reason and complex concept",
method =
"saveObs(HttpServletRequest, HttpServletResponse, String, RadiologyOrder, Obs Obs, BindingResult)")
public void saveObs_ShouldEditObsWithEditReasonAndComplexConcept() {
MockHttpSession mockSession = new MockHttpSession();
mockRequest.addParameter("saveObs", "saveObs");
mockRequest.setSession(mockSession);
when(obsErrors.hasErrors()).thenReturn(false);
ConceptComplex concept = new ConceptComplex();
ConceptDatatype cdt = new ConceptDatatype();
cdt.setHl7Abbreviation("ED");
concept.setDatatype(cdt);
mockObs.setConcept(concept);
ModelAndView modelAndView =
radiologyObsFormController.saveObs(
mockRequest, null, "Test Edit Reason", mockRadiologyOrder, mockObs, obsErrors);
assertNotNull(mockSession.getAttribute(WebConstants.OPENMRS_MSG_ATTR));
assertThat((String) mockSession.getAttribute(WebConstants.OPENMRS_MSG_ATTR), is("Obs.saved"));
assertThat(
modelAndView.getViewName(),
is(
"redirect:"
+ RADIOLOGY_OBS_FORM_URL
+ "orderId="
+ mockRadiologyOrder.getId()
+ "&obsId="
+ mockObs.getId()));
}
/**
* @see RadiologyObsFormController#saveObs(HttpServletRequest, HttpServletResponse, String,
* RadiologyOrder, Obs Obs, BindingResult)
*/
@Test
@Verifies(
value =
"should edit obs with edit reason, complex concept and request which is an instance of multihttpserveletrequest",
method =
"saveObs(HttpServletRequest, HttpServletResponse, String, RadiologyOrder, Obs Obs, BindingResult)")
public void
saveObs_ShouldEditObsWithEditReasonComplexConceptANdRequestWhichIsAnInstanceOfMultiHTTPServletRequest() {
MockHttpSession mockSession = new MockHttpSession();
MockMultipartHttpServletRequest mockRequest = new MockMultipartHttpServletRequest();
mockRequest.addParameter("saveObs", "saveObs");
mockRequest.setSession(mockSession);
when(obsErrors.hasErrors()).thenReturn(false);
ConceptComplex concept = new ConceptComplex();
ConceptDatatype cdt = new ConceptDatatype();
cdt.setHl7Abbreviation("ED");
concept.setDatatype(cdt);
mockObs.setConcept(concept);
final String fileName = "test.txt";
final byte[] content = "Hello World".getBytes();
MockMultipartFile mockMultipartFile =
new MockMultipartFile("complexDataFile", fileName, "text/plain", content);
mockRequest.addFile(mockMultipartFile);
radiologyObsFormController.saveObs(
mockRequest, null, "Test Edit Reason", mockRadiologyOrder, mockObs, obsErrors);
assertNotNull(mockSession.getAttribute(WebConstants.OPENMRS_MSG_ATTR));
assertThat((String) mockSession.getAttribute(WebConstants.OPENMRS_MSG_ATTR), is("Obs.saved"));
}
private Obs getObsGroup() {
ConceptDatatype datatype = new ConceptDatatype();
datatype.setUuid(ConceptDatatype.CODED_UUID);
datatype.setHl7Abbreviation(ConceptDatatype.CODED);
Concept concept = new Concept(1);
concept.setDatatype(datatype);
concept.addName(new ConceptName("MedSet", Locale.ENGLISH));
ConceptSource source = new ConceptSource();
source.setName("LOCAL");
ConceptMap map = new ConceptMap();
map.setSourceCode("100");
map.setSource(source);
concept.addConceptMapping(map);
Date dateCreated = new Date(213231421890234L);
Obs obs = new Obs(1);
obs.setConcept(concept);
obs.setDateCreated(dateCreated);
return obs;
}
@Before
public void setUp() throws Exception {
drugMetaDataMapper = new DrugMetaDataMapper();
drugConceptClass = new ConceptClass();
drugConceptClass.setUuid(ConceptClass.DRUG_UUID);
ConceptDatatype naDatatype = new ConceptDatatype();
naDatatype.setUuid(ConceptDatatype.N_A_UUID);
}
@Test
@Verifies(
value = "shouldSetTheValueComplexOfObsIfConceptIsComplex",
method = "createObs(Concept concept, Object value, Date datetime, String accessionNumber)")
public void createObs_shouldSetTheValueComplexOfObsIfConceptIsComplex() {
ComplexData complexData = new ComplexData("test", null);
Concept c = new Concept();
ConceptDatatype cd = new ConceptDatatype();
cd.setUuid(HtmlFormEntryConstants.COMPLEX_UUID);
c.setDatatype(cd);
Obs o = HtmlFormEntryUtil.createObs(c, complexData, null, null);
Assert.assertEquals(o.getValueComplex(), complexData.getTitle());
}
// private String usedInForms;
// private static Log log = LogFactory.getLog(ConceptSearchResult.class);
public ConceptSearchResult(
int id,
ConceptName name,
ConceptDescription description,
ConceptClass cclass,
ConceptDatatype datatype) {
this.conceptId = id;
this.conceptName = name.getName();
this.conceptDescription = description.getDescription();
this.conceptClass = cclass.getName();
this.conceptDatatype = datatype.getName();
}
/**
* Builds a coded result from an observation
*
* @param obs
*/
public Result(Obs obs) {
this(
obs.getObsDatetime(),
null,
obs.getValueAsBoolean(),
obs.getValueCoded(),
obs.getValueDatetime(),
obs.getValueNumeric(),
obs.getValueText(),
obs);
Concept concept = obs.getConcept();
ConceptDatatype conceptDatatype = null;
if (concept != null) {
conceptDatatype = concept.getDatatype();
if (conceptDatatype == null) {
return;
}
if (conceptDatatype.isCoded()) {
this.datatype = Datatype.CODED;
} else if (conceptDatatype.isNumeric()) {
this.datatype = Datatype.NUMERIC;
} else if (conceptDatatype.isDate()) {
this.datatype = Datatype.DATETIME;
} else if (conceptDatatype.isText()) {
this.datatype = Datatype.TEXT;
} else if (conceptDatatype.isBoolean()) {
this.datatype = Datatype.BOOLEAN;
}
}
}
/**
* Creates an OpenMRS Obs instance
*
* @param concept concept associated with the Obs
* @param value value associated with the Obs
* @param datetime date/time associated with the Obs (may be null)
* @param accessionNumber accession number associatd with the Obs (may be null)
* @return the created Obs instance
*/
public static Obs createObs(
Concept concept, Object value, Date datetime, String accessionNumber) {
Obs obs = new Obs();
obs.setConcept(concept);
ConceptDatatype dt = obs.getConcept().getDatatype();
if (dt.isNumeric()) {
obs.setValueNumeric(Double.parseDouble(value.toString()));
} else if (dt.isText()) {
if (value instanceof Location) {
obs.setValueText(((Location) value).getLocationId().toString());
} else {
obs.setValueText(value.toString());
}
} else if (dt.isCoded()) {
if (value instanceof Concept) obs.setValueCoded((Concept) value);
else obs.setValueCoded((Concept) convertToType(value.toString(), Concept.class));
} else if (dt.isBoolean()) {
boolean booleanValue =
value != null && !Boolean.FALSE.equals(value) && !"false".equals(value);
obs.setValueNumeric(booleanValue ? 1.0 : 0.0);
} else if (dt.isDate()) {
Date date = (Date) value;
obs.setValueDatetime(date);
} else if ("ZZ".equals(dt.getHl7Abbreviation())) {
// don't set a value
} else {
throw new IllegalArgumentException(
"concept datatype not yet implemented: "
+ dt.getName()
+ " with Hl7 Abbreviation: "
+ dt.getHl7Abbreviation());
}
if (datetime != null) obs.setObsDatetime(datetime);
if (accessionNumber != null) obs.setAccessionNumber(accessionNumber);
return obs;
}
@Test
public void shouldEvaluateOBRORUR01TemplateForOBSGroup() throws Exception {
// given
Encounter encounter = new Encounter();
Date date = new Date();
encounter.setEncounterDatetime(date);
encounter.setUuid("ENCOUNTER UUID");
EncounterType encounterType = new EncounterType();
encounterType.setName("ENCOUNTER TYPE NAME");
encounter.setEncounterType(encounterType);
Location location = new Location(1);
location.setUuid("LOCATION UUID");
location.setName("LOCATION NAME");
encounter.setLocation(location);
Person provider = new Person(1);
provider.setUuid("PROVIDER UUID");
provider.addName(
new PersonName("PROVIDER GIVENNAME", "PROVIDER MIDDLENAME", "PROVIDER FAMILYNAME"));
encounter.setProvider(provider);
ConceptSource source = new ConceptSource();
source.setName("AMPATH");
ConceptMap map = new ConceptMap();
map.setSourceCode("200");
map.setSource(source);
ConceptDatatype datatype = new ConceptDatatype();
datatype.setUuid(ConceptDatatype.NUMERIC_UUID);
datatype.setHl7Abbreviation(ConceptDatatype.NUMERIC);
ConceptNumeric concept = new ConceptNumeric();
concept.setDatatype(datatype);
concept.addConceptMapping(map);
concept.addName(new ConceptName("NumericConcept", Locale.ENGLISH));
concept.setUnits("mg");
Date dateCreated = new Date(213231421890234L);
Obs obs = new Obs(2);
obs.setConcept(concept);
obs.setDateCreated(dateCreated);
obs.setValueNumeric(10d);
obs.setObsGroup(getObsGroup());
obs.getObsGroup().addGroupMember(obs);
encounter.addObs(obs);
obs = new Obs(3);
obs.setConcept(concept);
obs.setDateCreated(dateCreated);
obs.setValueNumeric(23d);
encounter.addObs(obs);
Map<String, Object> bindings = new HashMap<String, Object>();
bindings.put("encounter", encounter);
bindings.put("implementationId", "MVP");
// when
HL7Template hl7Template = hl7QueryService.getHL7TemplateByName("Generic Obs Group");
String evaluatedTemplate = hl7QueryService.evaluateTemplate(hl7Template, bindings);
// then
evaluatedTemplate = StringUtils.deleteWhitespace(evaluatedTemplate);
Assert.assertEquals(
"<ORU_R01.ORDER_OBSERVATION><OBR><OBR.1>0</OBR.1><OBR.4><CE.1>100</CE.1>"
+ "<CE.2>MEDICALRECORDOBSERVATIONS</CE.2><CE.3>LOCAL</CE.3></OBR.4><OBR.18>0</OBR.18>"
+ "<OBR.29><EIP.2><EI.3>ENCOUNTERUUID</EI.3></EIP.2></OBR.29></OBR><ORU_R01.OBSERVATION>"
+ "<OBX><OBX.1>1</OBX.1><OBX.2>NM</OBX.2><OBX.3><CE.1>200</CE.1><CE.2>NumericConcept</CE.2>"
+ "<CE.3>AMPATH</CE.3></OBX.3><OBX.5>23.0</OBX.5><OBX.6><CE.1>mg</CE.1><CE.3>UCUM</CE.3></OBX.6>"
+ "<OBX.14><TS.1>"
+ new HL7TemplateFunctions().formatDate(dateCreated, null)
+ "</TS.1>"
+ "</OBX.14></OBX></ORU_R01.OBSERVATION></ORU_R01.ORDER_OBSERVATION>"
+ "<ORU_R01.ORDER_OBSERVATION><OBR><OBR.1>2</OBR.1><OBR.4><CE.1>100</CE.1><CE.2>MedSet</CE.2>"
+ "<CE.3>LOCAL</CE.3></OBR.4><OBR.18>0</OBR.18><OBR.29><EIP.2><EI.3>ENCOUNTERUUID</EI.3></EIP.2></OBR.29"
+ "></OBR><ORU_R01.OBSERVATION><OBX><OBX.1>2</OBX.1><OBX.2>NM</OBX.2><OBX.3><CE.1>200</CE.1>"
+ "<CE.2>NumericConcept</CE.2><CE.3>AMPATH</CE.3></OBX.3><OBX.5>10.0</OBX.5><OBX.6><CE.1>mg</CE.1>"
+ "<CE.3>UCUM</CE.3></OBX.6><OBX.14><TS.1>"
+ new HL7TemplateFunctions().formatDate(dateCreated, null)
+ "</TS.1></OBX.14></OBX></ORU_R01.OBSERVATION></ORU_R01.ORDER_OBSERVATION>",
evaluatedTemplate);
}