/** @should return person data for each obs in the passed context */
@Override
public EvaluatedObsData evaluate(ObsDataDefinition definition, EvaluationContext context)
throws EvaluationException {
EvaluatedObsData c = new EvaluatedObsData(definition, context);
// create a map of obs ids -> patient ids
HqlQueryBuilder q = new HqlQueryBuilder();
q.select("o.obsId", "o.personId");
q.from(Obs.class, "o");
q.whereObsIn("o.obsId", context);
Map<Integer, Integer> convertedIds =
evaluationService.evaluateToMap(q, Integer.class, Integer.class, context);
if (!convertedIds.keySet().isEmpty()) {
// create a new (person) evaluation context using the retrieved ids
PersonEvaluationContext personEvaluationContext = new PersonEvaluationContext();
personEvaluationContext.setBasePersons(
new PersonIdSet(new HashSet<Integer>(convertedIds.values())));
// evaluate the joined definition via this person context
PersonToObsDataDefinition def = (PersonToObsDataDefinition) definition;
EvaluatedPersonData pd =
Context.getService(PersonDataService.class)
.evaluate(def.getJoinedDefinition(), personEvaluationContext);
// now create the result set by mapping the results in the person data set to obs ids
for (Integer obsId : convertedIds.keySet()) {
c.addData(obsId, pd.getData().get(convertedIds.get(obsId)));
}
}
return c;
}
/** @should return patient data for each obs in the passed context */
@Override
public EvaluatedObsData evaluate(
ObsDataDefinition definition, EvaluationContext obsEvaluationContext)
throws EvaluationException {
DataSetQueryService dqs = Context.getService(DataSetQueryService.class);
EvaluatedObsData c = new EvaluatedObsData(definition, obsEvaluationContext);
// create a map of obs ids -> patient ids (note assumption that personId = patientId)
Set<Integer> obsIds = ObsDataUtil.getObsIdsForContext(obsEvaluationContext, true);
Map<Integer, Integer> convertedIds =
dqs.convertData(Person.class, "personId", null, Obs.class, "person.personId", obsIds);
// create a new (patient) evaluation context using the retrieved ids
EvaluationContext patientEvaluationContext = new EvaluationContext();
patientEvaluationContext.setBaseCohort(new Cohort(convertedIds.values()));
// evaluate the joined definition via this patient context
PatientToObsDataDefinition def = (PatientToObsDataDefinition) definition;
EvaluatedPatientData pd =
Context.getService(PatientDataService.class)
.evaluate(def.getJoinedDefinition(), patientEvaluationContext);
// now create the result set by mapping the results in the patient data set to obs ids
for (Integer obsId : obsIds) {
c.addData(obsId, pd.getData().get(convertedIds.get(obsId)));
}
return c;
}