private ValidationResult verifyCodeInternal(ValueSet vs, String code)
throws FileNotFoundException, ETooCostly, IOException, FHIRException {
if (vs.hasExpansion()) return verifyCodeInExpansion(vs, code);
else {
ValueSetExpansionOutcome vse = expansionCache.getExpander().expand(vs, null);
if (vse.getValueset() == null)
return new ValidationResult(IssueSeverity.ERROR, vse.getError(), vse.getErrorClass());
else return verifyCodeInExpansion(vse.getValueset(), code);
}
}
private ValidationResult verifyCodeInternal(
ValueSet vs, String system, String code, String display) throws Exception {
if (vs.hasExpansion()) return verifyCodeInExpansion(vs, system, code, display);
else {
ValueSetExpansionOutcome vse = expansionCache.getExpander().expand(vs, null);
if (vse.getValueset() != null)
return verifyCodeExternal(
vs, new Coding().setSystem(system).setCode(code).setDisplay(display), false);
else return verifyCodeInExpansion(vse.getValueset(), system, code, display);
}
}
@Override
public ValueSetExpansionComponent expandVS(ConceptSetComponent inc, boolean heirachical)
throws TerminologyServiceException {
ValueSet vs = new ValueSet();
vs.setCompose(new ValueSetComposeComponent());
vs.getCompose().getInclude().add(inc);
ValueSetExpansionOutcome vse = expandVS(vs, true, heirachical);
ValueSet valueset = vse.getValueset();
if (valueset == null)
throw new TerminologyServiceException("Error Expanding ValueSet: " + vse.getError());
return valueset.getExpansion();
}
private ValueSet doExpand(ValueSet theSource) {
validateIncludes("include", theSource.getCompose().getInclude());
validateIncludes("exclude", theSource.getCompose().getExclude());
HapiWorkerContext workerContext = new HapiWorkerContext(getContext(), myValidationSupport);
ValueSetExpansionOutcome outcome = workerContext.expand(theSource);
ValueSetExpansionComponent expansion = outcome.getValueset().getExpansion();
ValueSet retVal = new ValueSet();
retVal.getMeta().setLastUpdated(new Date());
retVal.setExpansion(expansion);
return retVal;
}
private ValidationResult handleByCache(ValueSet vs, Coding coding, boolean tryCache) {
String cacheId = cacheId(coding);
Map<String, ValidationResult> cache = validationCache.get(vs.getUrl());
if (cache == null) {
cache = new HashMap<String, IWorkerContext.ValidationResult>();
validationCache.put(vs.getUrl(), cache);
}
if (cache.containsKey(cacheId)) return cache.get(cacheId);
if (!tryCache) return null;
if (!cacheValidation) return null;
if (failed.contains(vs.getUrl())) return null;
ValueSetExpansionOutcome vse = expandVS(vs, true, false);
if (vse.getValueset() == null || notcomplete(vse.getValueset())) {
failed.add(vs.getUrl());
return null;
}
ValidationResult res = validateCode(coding, vse.getValueset());
cache.put(cacheId, res);
return res;
}
@Override
public ValidationResult validateCode(CodeableConcept code, ValueSet vs) {
try {
if (vs.hasExpansion()) return verifyCodeInternal(vs, code);
else {
// we'll try expanding first; if that doesn't work, then we'll just pass it to the server to
// validate
// ... could be a problem if the server doesn't have the code systems we have locally, so we
// try not to depend on the server
try {
ValueSetExpansionOutcome vse = expandVS(vs, true, false);
if (vse.getValueset() != null) return verifyCodeInternal(vse.getValueset(), code);
} catch (Exception e) {
// failed? we'll just try the server
}
return verifyCodeExternal(vs, code, true);
}
} catch (Exception e) {
return new ValidationResult(
IssueSeverity.FATAL,
"Error validating code \"" + code.toString() + "\": " + e.getMessage(),
TerminologyServiceErrorClass.SERVER_ERROR);
}
}
@Override
public ValueSetExpansionOutcome expandVS(ValueSet vs, boolean cacheOk, boolean heirarchical) {
try {
if (vs.hasExpansion()) {
return new ValueSetExpansionOutcome(vs.copy());
}
String cacheFn = null;
if (cache != null) {
cacheFn = Utilities.path(cache, determineCacheId(vs, heirarchical) + ".json");
if (new File(cacheFn).exists()) return loadFromCache(vs.copy(), cacheFn);
}
if (cacheOk && vs.hasUrl()) {
if (expProfile == null) throw new Exception("No ExpansionProfile provided");
ValueSetExpansionOutcome vse =
expansionCache.getExpander().expand(vs, expProfile.setExcludeNested(!heirarchical));
if (vse.getValueset() != null) {
if (cache != null) {
FileOutputStream s = new FileOutputStream(cacheFn);
newJsonParser().compose(new FileOutputStream(cacheFn), vse.getValueset());
s.close();
}
}
return vse;
} else {
ValueSetExpansionOutcome res = expandOnServer(vs, cacheFn);
if (cacheFn != null) {
if (res.getValueset() != null) {
saveToCache(res.getValueset(), cacheFn);
} else {
OperationOutcome oo = new OperationOutcome();
oo.addIssue().getDetails().setText(res.getError());
saveToCache(oo, cacheFn);
}
}
return res;
}
} catch (NoTerminologyServiceException e) {
return new ValueSetExpansionOutcome(
e.getMessage() == null ? e.getClass().getName() : e.getMessage(),
TerminologyServiceErrorClass.NOSERVICE);
} catch (Exception e) {
return new ValueSetExpansionOutcome(
e.getMessage() == null ? e.getClass().getName() : e.getMessage(),
TerminologyServiceErrorClass.UNKNOWN);
}
}
