private void checkMetadata(NXentry entry, List<ScanMetadata> scanMetadataList) { for (ScanMetadata scanMetadata : scanMetadataList) { MetadataType type = scanMetadata.getType(); NXobject object = getNexusObjectForMetadataType(entry, type); Map<String, Object> metadataFields = scanMetadata.getFields(); for (String metadataFieldName : metadataFields.keySet()) { Object expectedValue = scanMetadata.getFieldValue(metadataFieldName); Dataset dataset = DatasetUtils.convertToDataset(object.getDataset(metadataFieldName)); assertNotNull(dataset); assertEquals(1, dataset.getSize()); assertEquals(DTypeUtils.getDTypeFromObject(expectedValue), dataset.getDType()); assertEquals(expectedValue, dataset.getObjectAbs(0)); } } }
@Override public IDataset processImage(IDataset dataset, IMonitor monitor) { int dtype = DTypeUtils.getDType(dataset); int radius = ((KernelWidthModel) model).getWidth(); return Image.pseudoFlatFieldFilter(DatasetUtils.cast(dataset, dtype), radius); }