@Test public void testCircularROIBeanConversionToCircularROI() throws Exception { // CircularROI double radius = 100; ROIBean rbean = new CircularROIBean(); ((CircularROIBean) rbean).setName("circle"); ((CircularROIBean) rbean).setStartPoint(startPoint); ((CircularROIBean) rbean).setType("CircularROI"); ((CircularROIBean) rbean).setRadius(radius); CircularROI croi = (CircularROI) ROIBeanFactory.decapsulate(rbean); assertArrayEquals(startPoint, croi.getPoint(), 0); assertEquals(radius, croi.getRadius(), 0); }
// Note this is a bit of a integration test not a strict unit test @Test public void testFillingACircle() throws Exception { double xCentre = 0; double yCentre = 0; double radius = 1; CircularROI roi = new CircularROI(); roi.setPoint(xCentre, yCentre); roi.setRadius(radius); RasterModel model = new RasterModel(); model.setxStep(1); model.setyStep(1); // Get the point list IPointGenerator<RasterModel, Point> gen = service.createGenerator(model, roi); List<Point> pointList = gen.createPoints(); // Check the length of the lists are equal assertEquals(5, pointList.size()); // Check the points are correct and the order is maintained // 0 assertEquals(0, pointList.get(0).getX(), 1e-8); assertEquals(-1, pointList.get(0).getY(), 1e-8); // 1 assertEquals(-1, pointList.get(1).getX(), 1e-8); assertEquals(0, pointList.get(1).getY(), 1e-8); // 2 assertEquals(0, pointList.get(2).getX(), 1e-8); assertEquals(0, pointList.get(2).getY(), 1e-8); // 3 assertEquals(1, pointList.get(3).getX(), 1e-8); assertEquals(0, pointList.get(3).getY(), 1e-8); // 4 assertEquals(0, pointList.get(4).getX(), 1e-8); assertEquals(1, pointList.get(4).getY(), 1e-8); GeneratorUtil.testGeneratorPoints(gen); }
/** * @param spt starting point * @param pt * @return resized ROI */ @SuppressWarnings("unchecked") public T resize(double[] spt, double[] pt) { T rroi = null; if (!closed && handle == 4) return rroi; rroi = (T) roi.copy(); pt[0] -= spt[0]; pt[1] -= spt[1]; switch (handle) { case -1: // new definition rroi.setPoint(spt); break; case 0: // focus/centre rroi.addPoint(pt); break; case 1: // periapsis if (rroi instanceof CircularROI) { if (pt[0] == 0) break; CircularROI lroi = (CircularROI) rroi; // work out perpendicular displacement double r = lroi.getRadius(); r -= pt[0]; if (r < 0) r = 0; lroi.setRadius(r); } else if (rroi instanceof OrientableROIBase) { // work out perpendicular displacement double a = rroi.getAngle(); double d = pt[0] * Math.cos(a) + pt[1] * Math.sin(a); if (d == 0) break; if (rroi instanceof EllipticalROI) { EllipticalROI lroi = (EllipticalROI) rroi; double r = lroi.getSemiAxis(0) - d; if (r < 0) r = 0; lroi.setSemiAxis(0, r); } else if (rroi instanceof ParabolicROI) { ParabolicROI lroi = (ParabolicROI) rroi; double p = lroi.getFocalParameter() - d; if (p < 0) p = 0; lroi.setFocalParameter(p); } else if (rroi instanceof HyperbolicROI) { HyperbolicROI lroi = (HyperbolicROI) rroi; double l = lroi.getSemilatusRectum(); double e = lroi.getEccentricity(); double x = l / (1 + e) - d; e = l / x - 1; if (e < 1) e = 1; lroi.setEccentricity(e); } } break; case 2: if (rroi instanceof CircularROI) { if (pt[1] == 0) break; CircularROI lroi = (CircularROI) rroi; double r = lroi.getRadius(); r += pt[1]; if (r < 0) r = 0; lroi.setRadius(r); } else if (rroi instanceof OrientableROIBase) { // work out perpendicular displacement double a = rroi.getAngle(); double d = -pt[0] * Math.sin(a) + pt[1] * Math.cos(a); if (d == 0) break; if (rroi instanceof EllipticalROI) { EllipticalROI lroi = (EllipticalROI) rroi; // work out perpendicular displacement double r = lroi.getSemiAxis(1) + d; if (r < 0) r = 0; lroi.setSemiAxis(1, r); } else if (rroi instanceof ParabolicROI) { ParabolicROI lroi = (ParabolicROI) rroi; double p = lroi.getFocalParameter() + 0.5 * d; if (p < 0) p = 0; lroi.setFocalParameter(p); } else if (rroi instanceof HyperbolicROI) { HyperbolicROI lroi = (HyperbolicROI) rroi; double l = lroi.getSemilatusRectum() + d; if (l < 0) l = 0; lroi.setSemilatusRectum(l); } } break; case 3: if (rroi instanceof CircularROI) { if (pt[1] == 0) break; CircularROI lroi = (CircularROI) rroi; double r = lroi.getRadius(); r -= pt[1]; if (r < 0) r = 0; lroi.setRadius(r); } else if (rroi instanceof OrientableROIBase) { // work out perpendicular displacement double a = rroi.getAngle(); double d = -pt[0] * Math.sin(a) + pt[1] * Math.cos(a); if (d == 0) break; if (rroi instanceof EllipticalROI) { EllipticalROI lroi = (EllipticalROI) rroi; // work out perpendicular displacement double r = lroi.getSemiAxis(1) - d; if (r < 0) r = 0; lroi.setSemiAxis(1, r); } else if (rroi instanceof ParabolicROI) { ParabolicROI lroi = (ParabolicROI) rroi; double p = lroi.getFocalParameter() - 0.5 * d; if (p < 0) p = 0; lroi.setFocalParameter(p); } else if (rroi instanceof HyperbolicROI) { HyperbolicROI lroi = (HyperbolicROI) rroi; double l = lroi.getSemilatusRectum() - d; if (l < 0) l = 0; lroi.setSemilatusRectum(l); } } break; case 4: if (closed) { if (rroi instanceof CircularROI) { if (pt[0] == 0) break; CircularROI lroi = (CircularROI) rroi; double r = lroi.getRadius(); r += pt[0]; if (r < 0) r = 0; lroi.setRadius(r); } else if (rroi instanceof EllipticalROI) { EllipticalROI lroi = (EllipticalROI) rroi; // work out perpendicular displacement double a = lroi.getAngle(); double d = pt[0] * Math.cos(a) + pt[1] * Math.sin(a); if (d == 0) break; double r = lroi.getSemiAxis(0) + d; if (r < 0) r = 0; lroi.setSemiAxis(0, r); } } break; default: break; } return rroi; }