private void copyFiles(ByteArrayInputStream fis, File dest) {
FileOutputStream fos = null;
byte[] buffer = new byte[512]; // Buffer 4K at a time (you can change this).
int bytesRead;
logger.debug("fis?" + fis);
try {
fos = new FileOutputStream(dest);
while ((bytesRead = fis.read(buffer)) >= 0) {
fos.write(buffer, 0, bytesRead);
}
} catch (IOException ioe) { // error while copying files
OpenClinicaSystemException oe =
new OpenClinicaSystemException(
"Unable to copy file: "
+ fis
+ "to"
+ dest.getAbsolutePath()
+ "."
+ dest.getAbsolutePath()
+ ".");
oe.initCause(ioe);
oe.setStackTrace(ioe.getStackTrace());
throw oe;
} finally { // Ensure that the files are closed (if they were open).
if (fis != null) {
try {
fis.close();
} catch (IOException ioe) {
OpenClinicaSystemException oe =
new OpenClinicaSystemException(
"Unable to copy file: "
+ fis
+ "to"
+ dest.getAbsolutePath()
+ "."
+ dest.getAbsolutePath()
+ ".");
oe.initCause(ioe);
oe.setStackTrace(ioe.getStackTrace());
logger.debug(ioe.getMessage());
throw oe;
}
}
if (fos != null) {
try {
fos.close();
} catch (IOException ioe) {
OpenClinicaSystemException oe =
new OpenClinicaSystemException(
"Unable to copy file: "
+ fis
+ "to"
+ dest.getAbsolutePath()
+ "."
+ dest.getAbsolutePath()
+ ".");
oe.initCause(ioe);
oe.setStackTrace(ioe.getStackTrace());
logger.debug(ioe.getMessage());
throw oe;
}
}
}
}
private void copyBaseToDest(ResourceLoader resourceLoader) {
// System.out.println("Properties directory?"+resourceLoader.getResource("properties/xslt"));
ByteArrayInputStream listSrcFiles[] = new ByteArrayInputStream[10];
String[] fileNames = {
"odm_spss_dat.xsl",
"ODMToTAB.xsl",
"odm_to_html.xsl",
"odm_to_xslfo.xsl",
"ODM-XSLFO-Stylesheet.xsl",
"odm_spss_sps.xsl",
"copyXML.xsl",
"odm1.3_to_1.2.xsl",
"odm1.3_to_1.2_extensions.xsl"
};
try {
listSrcFiles[0] =
(ByteArrayInputStream)
resourceLoader
.getResource(
"classpath:properties"
+ File.separator
+ "xslt"
+ File.separator
+ fileNames[0])
.getInputStream();
listSrcFiles[1] =
(ByteArrayInputStream)
resourceLoader
.getResource(
"classpath:properties"
+ File.separator
+ "xslt"
+ File.separator
+ fileNames[1])
.getInputStream();
listSrcFiles[2] =
(ByteArrayInputStream)
resourceLoader
.getResource(
"classpath:properties"
+ File.separator
+ "xslt"
+ File.separator
+ fileNames[2])
.getInputStream();
listSrcFiles[3] =
(ByteArrayInputStream)
resourceLoader
.getResource(
"classpath:properties"
+ File.separator
+ "xslt"
+ File.separator
+ fileNames[3])
.getInputStream();
listSrcFiles[4] =
(ByteArrayInputStream)
resourceLoader
.getResource(
"classpath:properties"
+ File.separator
+ "xslt"
+ File.separator
+ fileNames[4])
.getInputStream();
listSrcFiles[5] =
(ByteArrayInputStream)
resourceLoader
.getResource(
"classpath:properties"
+ File.separator
+ "xslt"
+ File.separator
+ fileNames[5])
.getInputStream();
listSrcFiles[6] =
(ByteArrayInputStream)
resourceLoader
.getResource(
"classpath:properties"
+ File.separator
+ "xslt"
+ File.separator
+ fileNames[6])
.getInputStream();
listSrcFiles[7] =
(ByteArrayInputStream)
resourceLoader
.getResource(
"classpath:properties"
+ File.separator
+ "xslt"
+ File.separator
+ fileNames[7])
.getInputStream();
listSrcFiles[8] =
(ByteArrayInputStream)
resourceLoader
.getResource(
"classpath:properties"
+ File.separator
+ "xslt"
+ File.separator
+ fileNames[8])
.getInputStream();
} catch (IOException ioe) {
OpenClinicaSystemException oe = new OpenClinicaSystemException("Unable to read source files");
oe.initCause(ioe);
oe.setStackTrace(ioe.getStackTrace());
logger.debug(ioe.getMessage());
throw oe;
}
File dest = new File(getField("filePath") + "xslt");
if (!dest.exists()) {
if (!dest.mkdirs()) {
throw new OpenClinicaSystemException(
"Copying files, Could not create direcotry: " + dest.getAbsolutePath() + ".");
}
}
for (int i = 0; i < fileNames.length; i++) {
File dest1 = new File(dest, fileNames[i]);
// File src1 = listSrcFiles[i];
if (listSrcFiles[i] != null) copyFiles(listSrcFiles[i], dest1);
}
}