@Test
public void convertListOfSpeciesReferenceInSetOfVertices() {
Connector connector = Connector.makeConnector();
Model sbmlModel = new Model();
Species reactant1 = sbmlModel.createSpecies("id1");
Species reactant2 = sbmlModel.createSpecies("id2");
Reaction reaction = sbmlModel.createReaction("reaction_id");
// I'll use the reactants list just because I want a list of
// species references to work with
reaction.createReactant(reactant1);
reaction.createReactant(reactant2);
final Set<Vertex> collectedVertices = new HashSet<Vertex>();
Vertex outSide = VertexFactory.makeSimpleVertex();
Set<Vertex> vertices =
connector.convertToVertexSet(
reaction.getListOfReactants(),
new HashMap<Vertex, Vertex>(),
new VertexHandlingListener() {
@Override
public void vertexHandled(Vertex vertex) {
collectedVertices.add(vertex);
}
});
// here I repeat the control on the size because I'm using a different
// overload of the test below.
assertEquals(2, vertices.size());
assertEquals(2, collectedVertices.size());
assertEquals(collectedVertices, vertices);
assertFalse(vertices.contains(outSide));
}
