protected void parseGenotype(final EvolutionState state, final LineNumberReader reader)
throws IOException {
// read in the next line. The first item is the number of genes
String s = reader.readLine();
DecodeReturn d = new DecodeReturn(s);
Code.decode(d);
if (d.type != DecodeReturn.T_INTEGER) // uh oh
state.output.fatal(
"Individual with genome:\n"
+ s
+ "\n... does not have an integer at the beginning indicating the genome count.");
int lll = (int) (d.l);
genome = new boolean[lll];
// read in the genes
for (int i = 0; i < genome.length; i++) {
Code.decode(d);
genome[i] = (boolean) (d.l != 0);
}
}
