コード例 #1
0
ファイル: Macro.java プロジェクト: bramk/bnd
  String ls(String args[], boolean relative) {
    if (args.length < 2)
      throw new IllegalArgumentException(
          "the ${ls} macro must at least have a directory as parameter");

    File dir = domain.getFile(args[1]);
    if (!dir.isAbsolute())
      throw new IllegalArgumentException(
          "the ${ls} macro directory parameter is not absolute: " + dir);

    if (!dir.exists())
      throw new IllegalArgumentException(
          "the ${ls} macro directory parameter does not exist: " + dir);

    if (!dir.isDirectory())
      throw new IllegalArgumentException(
          "the ${ls} macro directory parameter points to a file instead of a directory: " + dir);

    Collection<File> files = new ArrayList<File>(new SortedList<File>(dir.listFiles()));

    for (int i = 2; i < args.length; i++) {
      Instructions filters = new Instructions(args[i]);
      files = filters.select(files, true);
    }

    List<String> result = new ArrayList<String>();
    for (File file : files) result.add(relative ? file.getName() : file.getAbsolutePath());

    return Processor.join(result, ",");
  }
コード例 #2
0
  public void init(Editor _editor) {
    this.m_editor = _editor;

    File toolRoot = null;
    try {
      toolRoot =
          new File(
                  SequantoAutomationTool.class
                      .getProtectionDomain()
                      .getCodeSource()
                      .getLocation()
                      .toURI())
              .getParentFile()
              .getParentFile();
    } catch (java.net.URISyntaxException ex) {
      toolRoot =
          new File(
                  SequantoAutomationTool.class
                      .getProtectionDomain()
                      .getCodeSource()
                      .getLocation()
                      .getPath())
              .getParentFile()
              .getParentFile();
    }

    m_generatorPy =
        new File(new File(toolRoot, "generator"), "generate_automation_defines.py")
            .getAbsolutePath();
    m_isWindows = System.getProperty("os.name").toLowerCase().contains("win");
    if (m_isWindows) {
      for (File root : File.listRoots()) {
        File[] files =
            root.listFiles(
                new FileFilter() {
                  public boolean accept(File f) {
                    return f.getName().toLowerCase().startsWith("python");
                  }
                });
        if (files != null) {
          for (File directory : files) {
            m_pythonPath = new File(directory, "python.exe");
            break;
          }
        }
      }
      if (m_pythonPath == null) {
        Base.showMessage(
            "ERROR",
            String.format(
                "Could not python interpreter - Generate Automation tool will not work."));
      }
    }
  }
コード例 #3
0
  /**
   * Garbage collect repository
   *
   * @throws Exception
   */
  public void gc() throws Exception {
    HashSet<byte[]> deps = new HashSet<byte[]>();

    // deps.add(SERVICE_JAR_FILE);

    for (File cmd : commandDir.listFiles()) {
      CommandData data = getData(CommandData.class, cmd);
      addDependencies(deps, data);
    }

    for (File service : serviceDir.listFiles()) {
      File dataFile = new File(service, "data");
      ServiceData data = getData(ServiceData.class, dataFile);
      addDependencies(deps, data);
    }

    int count = 0;
    for (File f : repoDir.listFiles()) {
      String name = f.getName();
      if (!deps.contains(name)) {
        if (!name.endsWith(".json")
            || !deps.contains(name.substring(0, name.length() - ".json".length()))) { // Remove
          // json
          // files
          // only
          // if
          // the
          // bin
          // is
          // going
          // as
          // well
          f.delete();
          count++;
        } else {

        }
      }
    }
    System.out.format("Garbage collection done (%d file(s) removed)%n", count);
  }
コード例 #4
0
  public List<CommandData> getCommands(File commandDir) throws Exception {
    List<CommandData> result = new ArrayList<CommandData>();

    if (!commandDir.exists()) {
      return result;
    }

    for (File f : commandDir.listFiles()) {
      CommandData data = getData(CommandData.class, f);
      if (data != null) result.add(data);
    }
    return result;
  }
コード例 #5
0
ファイル: browse_jsp.java プロジェクト: dalinhuang/daxieoa
  private ArrayList GetFolderTree(String s_Dir, String s_Flag, int n_Indent, int n_TreeIndex) {
    String s_List = "";
    ArrayList aSubFolders = new ArrayList();

    File file = new File(s_Dir);
    File[] filelist = file.listFiles();

    if (filelist != null && filelist.length > 0) {
      for (int i = 0; i < filelist.length; i++) {
        if (filelist[i].isDirectory()) {
          aSubFolders.add(filelist[i].getName());
        }
      }

      int n_Count = aSubFolders.size();
      String s_LastFlag = "";
      String s_Folder = "";
      for (int i = 1; i <= n_Count; i++) {
        if (i < n_Count) {
          s_LastFlag = "0";
        } else {
          s_LastFlag = "1";
        }

        s_Folder = aSubFolders.get(i - 1).toString();
        s_List =
            s_List
                + "arr"
                + s_Flag
                + "["
                + String.valueOf(n_TreeIndex)
                + "]=new Array(\""
                + s_Folder
                + "\","
                + String.valueOf(n_Indent)
                + ", "
                + s_LastFlag
                + ");\n";
        n_TreeIndex = n_TreeIndex + 1;
        ArrayList a_Temp =
            GetFolderTree(s_Dir + s_Folder + sFileSeparator, s_Flag, n_Indent + 1, n_TreeIndex);
        s_List = s_List + a_Temp.get(0).toString();
        n_TreeIndex = Integer.valueOf(a_Temp.get(1).toString()).intValue();
      }
    }

    ArrayList a_Return = new ArrayList();
    a_Return.add(s_List);
    a_Return.add(String.valueOf(n_TreeIndex));
    return a_Return;
  }
コード例 #6
0
  public List<ServiceData> getServices(File serviceDir) throws Exception {
    List<ServiceData> result = new ArrayList<ServiceData>();

    if (!serviceDir.exists()) {
      return result;
    }

    for (File sdir : serviceDir.listFiles()) {
      File dataFile = new File(sdir, "data");
      ServiceData data = getData(ServiceData.class, dataFile);
      result.add(data);
    }
    return result;
  }
コード例 #7
0
 static void listPath(File path, FileFilter filter) {
   File files[]; // list of files in a directory
   indentLevel++; // going down...
   // create list of files in this dir
   files = path.listFiles(filter);
   // Sort with help of Collections API
   Arrays.sort(files);
   for (int i = 0, n = files.length; i < n; i++) {
     for (int indent = 0; indent < indentLevel; indent++) {
       System.out.print("    ");
     }
     if (files[i].isDirectory()) {
       System.out.println(files[i].toString());
       // recursively descend dir tree
       listPath(files[i], filter);
     } else {
       processFile(files[i]);
     }
   }
   indentLevel--; // and going up
 }
コード例 #8
0
 // remove temp files, the pipeline.jar operator isn't working.
 public void deleteTempFiles() {
   System.out.println("\nRemoving these temp files:");
   File workingDir = new File(System.getProperty("user.dir"));
   File[] toExamine = workingDir.listFiles();
   for (File f : toExamine) {
     boolean d = false;
     String n = f.getName();
     if (n.startsWith("pipeinstancelog")) d = true;
     else if (n.contains(".DOC.sample")) d = true;
     else if (n.contains("allDepths.")) d = true;
     else if (n.startsWith("nocalls.")) d = true;
     else if (n.startsWith("snpeff.")) d = true;
     else if (n.contains("plice")) d = true;
     if (d) {
       System.out.println("\t" + n);
       f.deleteOnExit();
     }
   }
   // delete the temp uncompressed vcf (required by Pipeline.jar)
   if (deleteTempVcf) System.out.println("\t" + finalVcf.getName());
 }
コード例 #9
0
ファイル: browse_jsp.java プロジェクト: dalinhuang/daxieoa
  private void InitUpload() throws ServletException, IOException {
    String sConfig = myUtil.ReadFile(myUtil.getConfigFileRealPath(m_request.getServletPath()));
    ArrayList aStyle = myUtil.getConfigArray("Style", sConfig);

    String sAllowExt, sUploadDir, sBaseUrl, sContentPath;
    String sCurrDir, sDir;
    int nAllowBrowse;
    String sPathShareImage, sPathShareFlash, sPathShareMedia, sPathShareOther;

    // param
    String sType = myUtil.dealNull(m_request.getParameter("type")).toUpperCase();
    String sStyleName = myUtil.dealNull(m_request.getParameter("style"));
    String sCusDir = myUtil.dealNull(m_request.getParameter("cusdir"));
    String sAction = myUtil.dealNull(m_request.getParameter("action")).toUpperCase();

    String s_SKey = myUtil.dealNull(m_request.getParameter("skey"));

    // InitUpload

    String[] aStyleConfig = new String[1];
    boolean bValidStyle = false;

    for (int i = 0; i < aStyle.size(); i++) {
      aStyleConfig = myUtil.split(aStyle.get(i).toString(), "|||");
      if (sStyleName.toLowerCase().equals(aStyleConfig[0].toLowerCase())) {
        bValidStyle = true;
        break;
      }
    }

    if (!bValidStyle) {
      out.print(getOutScript("alert('Invalid Style!')"));
      out.close();
      return;
    }

    if (!aStyleConfig[61].equals("1")) {
      sCusDir = "";
    }

    String ss_FileSize = "",
        ss_FileBrowse = "",
        ss_SpaceSize = "",
        ss_SpacePath = "",
        ss_PathMode = "",
        ss_PathUpload = "",
        ss_PathCusDir = "",
        ss_PathCode = "",
        ss_PathView = "";
    if ((aStyleConfig[61].equals("2")) && (!s_SKey.equals(""))) {
      ss_FileSize =
          (String) myUtil.dealNull(m_session.getAttribute("eWebEditor_" + s_SKey + "_FileSize"));
      ss_FileBrowse =
          (String) myUtil.dealNull(m_session.getAttribute("eWebEditor_" + s_SKey + "_FileBrowse"));
      ss_SpaceSize =
          (String) myUtil.dealNull(m_session.getAttribute("eWebEditor_" + s_SKey + "_SpaceSize"));
      ss_SpacePath =
          (String) myUtil.dealNull(m_session.getAttribute("eWebEditor_" + s_SKey + "_SpacePath"));
      ss_PathMode =
          (String) myUtil.dealNull(m_session.getAttribute("eWebEditor_" + s_SKey + "_PathMode"));
      ss_PathUpload =
          (String) myUtil.dealNull(m_session.getAttribute("eWebEditor_" + s_SKey + "_PathUpload"));
      ss_PathCusDir =
          (String) myUtil.dealNull(m_session.getAttribute("eWebEditor_" + s_SKey + "_PathCusDir"));
      ss_PathCode =
          (String) myUtil.dealNull(m_session.getAttribute("eWebEditor_" + s_SKey + "_PathCode"));
      ss_PathView =
          (String) myUtil.dealNull(m_session.getAttribute("eWebEditor_" + s_SKey + "_PathView"));

      if (myUtil.IsInt(ss_FileSize)) {
        aStyleConfig[11] = ss_FileSize;
        aStyleConfig[12] = ss_FileSize;
        aStyleConfig[13] = ss_FileSize;
        aStyleConfig[14] = ss_FileSize;
        aStyleConfig[15] = ss_FileSize;
        aStyleConfig[45] = ss_FileSize;
      } else {
        ss_FileSize = "";
      }
      if (ss_FileBrowse.equals("0") || ss_FileBrowse.equals("1")) {
        aStyleConfig[43] = ss_FileBrowse;
      } else {
        ss_FileBrowse = "";
      }
      if (myUtil.IsInt(ss_SpaceSize)) {
        aStyleConfig[78] = ss_SpaceSize;
      } else {
        ss_SpaceSize = "";
      }
      if (!ss_PathMode.equals("")) {
        aStyleConfig[19] = ss_PathMode;
      }
      if (!ss_PathUpload.equals("")) {
        aStyleConfig[3] = ss_PathUpload;
      }
      if (!ss_PathCode.equals("")) {
        aStyleConfig[23] = ss_PathCode;
      }
      if (!ss_PathView.equals("")) {
        aStyleConfig[22] = ss_PathView;
      }

      sCusDir = ss_PathCusDir;
    }

    sBaseUrl = aStyleConfig[19];
    nAllowBrowse = Integer.valueOf(aStyleConfig[43]).intValue();

    if (nAllowBrowse != 1) {
      out.print(getOutScript("alert('Do not allow browse!')"));
      out.close();
      return;
    }

    if (!sCusDir.equals("")) {
      sCusDir = myUtil.replace(sCusDir, "\\", "/");
      if ((sCusDir.startsWith("/"))
          || (sCusDir.startsWith("."))
          || (sCusDir.endsWith("."))
          || (sCusDir.indexOf("./") >= 0)
          || (sCusDir.indexOf("/.") >= 0)
          || (sCusDir.indexOf("//") >= 0)
          || (sCusDir.indexOf("..") >= 0)) {
        sCusDir = "";
      } else {
        if (!sCusDir.endsWith("/")) {
          sCusDir = sCusDir + "/";
        }
      }
    }

    sUploadDir = aStyleConfig[3];
    if (!sBaseUrl.equals("3")) {
      sUploadDir = myUtil.getRealPathFromRelative(m_request.getServletPath(), sUploadDir);
    }
    sUploadDir = GetSlashPath(sUploadDir);
    sUploadDir =
        sUploadDir
            + myUtil.replace(myUtil.replace(sCusDir, "/", sFileSeparator), "\\", sFileSeparator);

    if (sType.equals("FILE")) {
      sAllowExt = aStyleConfig[6];
    } else if (sType.equals("MEDIA")) {
      sAllowExt = aStyleConfig[9];
    } else if (sType.equals("FLASH")) {
      sAllowExt = aStyleConfig[7];
    } else {
      sAllowExt = aStyleConfig[8];
    }

    sPathShareImage =
        GetSlashPath(
            myUtil.getRealPathFromRelative(m_request.getServletPath(), "sharefile/image/"));
    sPathShareFlash =
        GetSlashPath(
            myUtil.getRealPathFromRelative(m_request.getServletPath(), "sharefile/flash/"));
    sPathShareMedia =
        GetSlashPath(
            myUtil.getRealPathFromRelative(m_request.getServletPath(), "sharefile/media/"));
    sPathShareOther =
        GetSlashPath(
            myUtil.getRealPathFromRelative(m_request.getServletPath(), "sharefile/other/"));

    String s_Out = "";
    if (sAction.equals("FILE")) {

      String s_ReturnFlag = myUtil.dealNull(m_request.getParameter("returnflag"));
      String s_FolderType = myUtil.dealNull(m_request.getParameter("foldertype"));
      String s_Dir = myUtil.dealNull(m_request.getParameter("dir"));
      s_Dir = java.net.URLDecoder.decode(s_Dir, "UTF-" + "8");

      String s_CurrDir = "";
      if (s_FolderType.equals("upload")) {
        s_CurrDir = sUploadDir;
      } else if (s_FolderType.equals("shareimage")) {
        sAllowExt = "";
        s_CurrDir = sPathShareImage;
      } else if (s_FolderType.equals("shareflash")) {
        sAllowExt = "";
        s_CurrDir = sPathShareFlash;
      } else if (s_FolderType.equals("sharemedia")) {
        sAllowExt = "";
        s_CurrDir = sPathShareMedia;
      } else {
        s_FolderType = "shareother";
        sAllowExt = "";
        s_CurrDir = sPathShareOther;
      }

      s_Dir = myUtil.replace(s_Dir, "\\", "/");
      if ((s_Dir.startsWith("/"))
          || (s_Dir.startsWith("."))
          || (s_Dir.endsWith("."))
          || (s_Dir.indexOf("./") >= 0)
          || (s_Dir.indexOf("/.") >= 0)
          || (s_Dir.indexOf("//") >= 0)
          || (s_Dir.indexOf("..") >= 0)) {
        s_Dir = "";
      }

      String s_Dir2 = myUtil.replace(s_Dir, "/", sFileSeparator);
      s_Dir2 = myUtil.replace(s_Dir2, "\\", sFileSeparator);

      if (!s_Dir.equals("")) {
        if (CheckValidDir(s_CurrDir + s_Dir2)) {
          s_CurrDir += s_Dir2;
        } else {
          s_Dir = "";
        }
      }

      if (CheckValidDir(s_CurrDir)) {
        File file = new File(s_CurrDir);
        File[] filelist = file.listFiles();
        if (filelist != null && filelist.length > 0) {
          int n = -1;
          for (int i = 0; i < filelist.length; i++) {
            if (filelist[i].isFile()) {
              String s_FileName = filelist[i].getName();
              String s_FileExt = s_FileName.substring(s_FileName.lastIndexOf(".") + 1);
              s_FileExt = s_FileExt.toLowerCase();
              if (CheckValidExt(sAllowExt, s_FileExt)) {
                n++;
                s_Out =
                    s_Out
                        + "arr["
                        + String.valueOf(n)
                        + "]=new Array(\""
                        + s_FileName
                        + "\", \""
                        + String.valueOf(convertFileSize(filelist[i].length()))
                        + "\",\""
                        + formatDate(new Date(filelist[i].lastModified()))
                        + "\");\n";
              }
            }
          }
        }
      }

      s_Out =
          "var arr = new Array();\n"
              + s_Out
              + "parent.setFileList('"
              + s_ReturnFlag
              + "', '"
              + s_FolderType
              + "', '"
              + s_Dir
              + "', arr);";
      out.print(getOutScript(s_Out));

    } else {

      s_Out = "var arrUpload = new Array();\n";
      s_Out += "var arrShareImage = new Array();\n";
      s_Out += "var arrShareFlash = new Array();\n";
      s_Out += "var arrShareMedia = new Array();\n";
      s_Out += "var arrShareOther = new Array();\n";

      s_Out += GetFolderTree(sUploadDir, "Upload", 1, 0).get(0).toString();

      sAllowExt = "";
      if (sType.equals("FILE")) {
        s_Out += GetFolderTree(sPathShareImage, "ShareImage", 1, 0).get(0).toString();
        s_Out += GetFolderTree(sPathShareFlash, "ShareFlash", 1, 0).get(0).toString();
        s_Out += GetFolderTree(sPathShareMedia, "ShareMedia", 1, 0).get(0).toString();
        s_Out += GetFolderTree(sPathShareOther, "ShareOther", 1, 0).get(0).toString();
      } else if (sType.equals("MEDIA")) {
        s_Out += GetFolderTree(sPathShareMedia, "ShareMedia", 1, 0).get(0).toString();
      } else if (sType.equals("FLASH")) {
        s_Out += GetFolderTree(sPathShareFlash, "ShareFlash", 1, 0).get(0).toString();
      } else {
        s_Out += GetFolderTree(sPathShareImage, "ShareImage", 1, 0).get(0).toString();
      }

      s_Out +=
          "parent.setFolderList(arrUpload, arrShareImage, arrShareFlash, arrShareMedia, arrShareOther);";
      out.print(getOutScript(s_Out));
    }
  }