public static java.util.Set extractIncludeDiagnosisInDischargeReportSet( ims.domain.ILightweightDomainFactory domainFactory, ims.core.vo.IncludeDiagnosisInDischargeReportVoCollection voCollection, java.util.Set domainObjectSet, HashMap domMap) { int size = (null == voCollection) ? 0 : voCollection.size(); if (domainObjectSet == null) { domainObjectSet = new java.util.HashSet(); } java.util.Set newSet = new java.util.HashSet(); for (int i = 0; i < size; i++) { ims.core.vo.IncludeDiagnosisInDischargeReportVo vo = voCollection.get(i); ims.core.clinical.domain.objects.IncludeDiagnosisInDischargeReport domainObject = IncludeDiagnosisInDischargeReportVoAssembler.extractIncludeDiagnosisInDischargeReport( domainFactory, vo, domMap); // TODO: This can only occur in the situation of a stale object exception. For now leave it to // the Interceptor to handle it. if (domainObject == null) { continue; } // Trying to avoid the hibernate collection being marked as dirty via its public interface // methods. (like add) if (!domainObjectSet.contains(domainObject)) domainObjectSet.add(domainObject); newSet.add(domainObject); } java.util.Set removedSet = new java.util.HashSet(); java.util.Iterator iter = domainObjectSet.iterator(); // Find out which objects need to be removed while (iter.hasNext()) { ims.domain.DomainObject o = (ims.domain.DomainObject) iter.next(); if ((o == null || o.getIsRIE() == null || !o.getIsRIE().booleanValue()) && !newSet.contains(o)) { removedSet.add(o); } } iter = removedSet.iterator(); // Remove the unwanted objects while (iter.hasNext()) { domainObjectSet.remove(iter.next()); } return domainObjectSet; }
public static java.util.List extractIncludeDiagnosisInDischargeReportList( ims.domain.ILightweightDomainFactory domainFactory, ims.core.vo.IncludeDiagnosisInDischargeReportVoCollection voCollection, java.util.List domainObjectList, HashMap domMap) { int size = (null == voCollection) ? 0 : voCollection.size(); if (domainObjectList == null) { domainObjectList = new java.util.ArrayList(); } for (int i = 0; i < size; i++) { ims.core.vo.IncludeDiagnosisInDischargeReportVo vo = voCollection.get(i); ims.core.clinical.domain.objects.IncludeDiagnosisInDischargeReport domainObject = IncludeDiagnosisInDischargeReportVoAssembler.extractIncludeDiagnosisInDischargeReport( domainFactory, vo, domMap); // TODO: This can only occur in the situation of a stale object exception. For now leave it to // the Interceptor to handle it. if (domainObject == null) { continue; } int domIdx = domainObjectList.indexOf(domainObject); if (domIdx == -1) { domainObjectList.add(i, domainObject); } else if (i != domIdx && i < domainObjectList.size()) { Object tmp = domainObjectList.get(i); domainObjectList.set(i, domainObjectList.get(domIdx)); domainObjectList.set(domIdx, tmp); } } // Remove all ones in domList where index > voCollection.size() as these should // now represent the ones removed from the VO collection. No longer referenced. int i1 = domainObjectList.size(); while (i1 > size) { domainObjectList.remove(i1 - 1); i1 = domainObjectList.size(); } return domainObjectList; }
public static ims.core.clinical.domain.objects.PatientDiagnosis extractPatientDiagnosis( ims.domain.ILightweightDomainFactory domainFactory, ims.core.vo.PatientDiagnosisEDischargeVo valueObject, HashMap domMap) { if (null == valueObject) { return null; } Integer id = valueObject.getID_PatientDiagnosis(); ims.core.clinical.domain.objects.PatientDiagnosis domainObject = null; if (null == id) { if (domMap.get(valueObject) != null) { return (ims.core.clinical.domain.objects.PatientDiagnosis) domMap.get(valueObject); } // ims.core.vo.PatientDiagnosisEDischargeVo ID_PatientDiagnosis field is unknown domainObject = new ims.core.clinical.domain.objects.PatientDiagnosis(); domMap.put(valueObject, domainObject); } else { String key = (valueObject.getClass().getName() + "__" + valueObject.getID_PatientDiagnosis()); if (domMap.get(key) != null) { return (ims.core.clinical.domain.objects.PatientDiagnosis) domMap.get(key); } domainObject = (ims.core.clinical.domain.objects.PatientDiagnosis) domainFactory.getDomainObject( ims.core.clinical.domain.objects.PatientDiagnosis.class, id); // TODO: Not sure how this should be handled. Effectively it must be a staleobject exception, // but maybe should be handled as that further up. if (domainObject == null) return null; domMap.put(key, domainObject); } domainObject.setVersion(valueObject.getVersion_PatientDiagnosis()); domainObject.setStatusHistory( ims.clinical.vo.domain.PatientDiagnosisStatusVoAssembler.extractPatientDiagnosisStatusSet( domainFactory, valueObject.getStatusHistory(), domainObject.getStatusHistory(), domMap)); // This is to overcome a bug in both Sybase and Oracle which prevents them from storing an empty // string correctly // Sybase stores it as a single space, Oracle stores it as NULL. This fix will make them // consistent at least. if (valueObject.getDiagnosisDescription() != null && valueObject.getDiagnosisDescription().equals("")) { valueObject.setDiagnosisDescription(null); } domainObject.setDiagnosisDescription(valueObject.getDiagnosisDescription()); ims.framework.utils.PartialDate DiagnosedDate = valueObject.getDiagnosedDate(); Integer value3 = null; if (null != DiagnosedDate) { value3 = DiagnosedDate.toInteger(); } domainObject.setDiagnosedDate(value3); // SaveAsRefVO - treated as a refVo in extract methods ims.core.clinical.domain.objects.Diagnosis value4 = null; if (null != valueObject.getDiagnosis()) { if (valueObject.getDiagnosis().getBoId() == null) { if (domMap.get(valueObject.getDiagnosis()) != null) { value4 = (ims.core.clinical.domain.objects.Diagnosis) domMap.get(valueObject.getDiagnosis()); } } else { value4 = (ims.core.clinical.domain.objects.Diagnosis) domainFactory.getDomainObject( ims.core.clinical.domain.objects.Diagnosis.class, valueObject.getDiagnosis().getBoId()); } } domainObject.setDiagnosis(value4); // create LookupInstance from vo LookupType ims.domain.lookups.LookupInstance value5 = null; if (null != valueObject.getSourceofInformation()) { value5 = domainFactory.getLookupInstance(valueObject.getSourceofInformation().getID()); } domainObject.setSourceofInformation(value5); domainObject.setIsComplication(valueObject.getIsComplication()); domainObject.setIsComorbidity(valueObject.getIsComorbidity()); java.util.Date value8 = null; ims.framework.utils.Date date8 = valueObject.getDateResolved(); if (date8 != null) { value8 = date8.getDate(); } domainObject.setDateResolved(value8); // SaveAsRefVO - treated as a refVo in extract methods ims.core.admin.domain.objects.CareContext value9 = null; if (null != valueObject.getCareContext()) { if (valueObject.getCareContext().getBoId() == null) { if (domMap.get(valueObject.getCareContext()) != null) { value9 = (ims.core.admin.domain.objects.CareContext) domMap.get(valueObject.getCareContext()); } } else { value9 = (ims.core.admin.domain.objects.CareContext) domainFactory.getDomainObject( ims.core.admin.domain.objects.CareContext.class, valueObject.getCareContext().getBoId()); } } domainObject.setCareContext(value9); // create LookupInstance from vo LookupType ims.domain.lookups.LookupInstance value10 = null; if (null != valueObject.getDiagLaterality()) { value10 = domainFactory.getLookupInstance(valueObject.getDiagLaterality().getID()); } domainObject.setDiagLaterality(value10); // This is to overcome a bug in both Sybase and Oracle which prevents them from storing an empty // string correctly // Sybase stores it as a single space, Oracle stores it as NULL. This fix will make them // consistent at least. if (valueObject.getSiteText() != null && valueObject.getSiteText().equals("")) { valueObject.setSiteText(null); } domainObject.setSiteText(valueObject.getSiteText()); domainObject.setAuthoringInfo( ims.core.vo.domain.AuthoringInformationVoAssembler.extractAuthoringInformation( domainFactory, valueObject.getAuthoringInfo(), domMap)); domainObject.setIncludeDiagnosisInDiscReports( ims.core.vo.domain.IncludeDiagnosisInDischargeReportVoAssembler .extractIncludeDiagnosisInDischargeReportSet( domainFactory, valueObject.getIncludeDiagnosisInDiscReports(), domainObject.getIncludeDiagnosisInDiscReports(), domMap)); domainObject.setIsPrevRelevantDiagnosis(valueObject.getIsPrevRelevantDiagnosis()); java.util.Date value16 = null; ims.framework.utils.Date date16 = valueObject.getDateOnset(); if (date16 != null) { value16 = date16.getDate(); } domainObject.setDateOnset(value16); ims.core.admin.domain.objects.ClinicalContact value17 = null; if (null != valueObject.getClinicalContact()) { if (valueObject.getClinicalContact().getBoId() == null) { if (domMap.get(valueObject.getClinicalContact()) != null) { value17 = (ims.core.admin.domain.objects.ClinicalContact) domMap.get(valueObject.getClinicalContact()); } } else if (valueObject.getBoVersion() == -1) // RefVo was not modified since obtained from the Assembler, no need to update the // BO field { value17 = domainObject.getClinicalContact(); } else { value17 = (ims.core.admin.domain.objects.ClinicalContact) domainFactory.getDomainObject( ims.core.admin.domain.objects.ClinicalContact.class, valueObject.getClinicalContact().getBoId()); } } domainObject.setClinicalContact(value17); domainObject.setPrimaryForCareSpells( ims.core.vo.domain.CSPrimaryDiagnosisVoAssembler.extractCsPrimaryDiagnosisSet( domainFactory, valueObject.getPrimaryForCareSpells(), domainObject.getPrimaryForCareSpells(), domMap)); domainObject.setCoMorbidityForEpisodeOfCares( ims.core.vo.domain.EpisodeOfCareCoMorbidityVoAssembler.extractEpisodeOfCareCoMorbiditySet( domainFactory, valueObject.getCoMorbidityForEpisodeOfCares(), domainObject.getCoMorbidityForEpisodeOfCares(), domMap)); ims.core.admin.domain.objects.EpisodeOfCare value20 = null; if (null != valueObject.getEpisodeOfCare()) { if (valueObject.getEpisodeOfCare().getBoId() == null) { if (domMap.get(valueObject.getEpisodeOfCare()) != null) { value20 = (ims.core.admin.domain.objects.EpisodeOfCare) domMap.get(valueObject.getEpisodeOfCare()); } } else if (valueObject.getBoVersion() == -1) // RefVo was not modified since obtained from the Assembler, no need to update the // BO field { value20 = domainObject.getEpisodeOfCare(); } else { value20 = (ims.core.admin.domain.objects.EpisodeOfCare) domainFactory.getDomainObject( ims.core.admin.domain.objects.EpisodeOfCare.class, valueObject.getEpisodeOfCare().getBoId()); } } domainObject.setEpisodeOfCare(value20); domainObject.setDiagnosedOnAdmission(valueObject.getDiagnosedOnAdmission()); return domainObject; }
/** * Update the ValueObject with the Domain Object. * * @param map DomainObjectMap of DomainObjects to already created ValueObjects. * @param valueObject to be updated * @param domainObject ims.core.clinical.domain.objects.PatientDiagnosis */ public static ims.core.vo.PatientDiagnosisEDischargeVo insert( DomainObjectMap map, ims.core.vo.PatientDiagnosisEDischargeVo valueObject, ims.core.clinical.domain.objects.PatientDiagnosis domainObject) { if (null == domainObject) { return valueObject; } if (null == map) { map = new DomainObjectMap(); } valueObject.setID_PatientDiagnosis(domainObject.getId()); valueObject.setIsRIE(domainObject.getIsRIE()); // If this is a recordedInError record, and the domainObject // value isIncludeRecord has not been set, then we return null and // not the value object if (valueObject.getIsRIE() != null && valueObject.getIsRIE().booleanValue() == true && !domainObject.isIncludeRecord()) return null; // If this is not a recordedInError record, and the domainObject // value isIncludeRecord has been set, then we return null and // not the value object if ((valueObject.getIsRIE() == null || valueObject.getIsRIE().booleanValue() == false) && domainObject.isIncludeRecord()) return null; // StatusHistory valueObject.setStatusHistory( ims.clinical.vo.domain.PatientDiagnosisStatusVoAssembler .createPatientDiagnosisStatusVoCollectionFromPatientDiagnosisStatus( map, domainObject.getStatusHistory())); // DiagnosisDescription valueObject.setDiagnosisDescription(domainObject.getDiagnosisDescription()); // DiagnosedDate Integer DiagnosedDate = domainObject.getDiagnosedDate(); if (null != DiagnosedDate) { valueObject.setDiagnosedDate(new ims.framework.utils.PartialDate(DiagnosedDate)); } // Diagnosis valueObject.setDiagnosis( ims.core.vo.domain.DiagLiteVoAssembler.create(map, domainObject.getDiagnosis())); // SourceofInformation ims.domain.lookups.LookupInstance instance5 = domainObject.getSourceofInformation(); if (null != instance5) { ims.framework.utils.ImagePath img = null; ims.framework.utils.Color color = null; img = null; if (instance5.getImage() != null) { img = new ims.framework.utils.ImagePath( instance5.getImage().getImageId(), instance5.getImage().getImagePath()); } color = instance5.getColor(); if (color != null) color.getValue(); ims.core.vo.lookups.SourceofInformation voLookup5 = new ims.core.vo.lookups.SourceofInformation( instance5.getId(), instance5.getText(), instance5.isActive(), null, img, color); ims.core.vo.lookups.SourceofInformation parentVoLookup5 = voLookup5; ims.domain.lookups.LookupInstance parent5 = instance5.getParent(); while (parent5 != null) { if (parent5.getImage() != null) { img = new ims.framework.utils.ImagePath( parent5.getImage().getImageId(), parent5.getImage().getImagePath()); } else { img = null; } color = parent5.getColor(); if (color != null) color.getValue(); parentVoLookup5.setParent( new ims.core.vo.lookups.SourceofInformation( parent5.getId(), parent5.getText(), parent5.isActive(), null, img, color)); parentVoLookup5 = parentVoLookup5.getParent(); parent5 = parent5.getParent(); } valueObject.setSourceofInformation(voLookup5); } // isComplication valueObject.setIsComplication(domainObject.isIsComplication()); // isComorbidity valueObject.setIsComorbidity(domainObject.isIsComorbidity()); // DateResolved java.util.Date DateResolved = domainObject.getDateResolved(); if (null != DateResolved) { valueObject.setDateResolved(new ims.framework.utils.Date(DateResolved)); } // CareContext valueObject.setCareContext( ims.core.vo.domain.CareContextForEdischargeDiagnosisVoAssembler.create( map, domainObject.getCareContext())); // DiagLaterality ims.domain.lookups.LookupInstance instance10 = domainObject.getDiagLaterality(); if (null != instance10) { ims.framework.utils.ImagePath img = null; ims.framework.utils.Color color = null; img = null; if (instance10.getImage() != null) { img = new ims.framework.utils.ImagePath( instance10.getImage().getImageId(), instance10.getImage().getImagePath()); } color = instance10.getColor(); if (color != null) color.getValue(); ims.core.vo.lookups.LateralityLRB voLookup10 = new ims.core.vo.lookups.LateralityLRB( instance10.getId(), instance10.getText(), instance10.isActive(), null, img, color); ims.core.vo.lookups.LateralityLRB parentVoLookup10 = voLookup10; ims.domain.lookups.LookupInstance parent10 = instance10.getParent(); while (parent10 != null) { if (parent10.getImage() != null) { img = new ims.framework.utils.ImagePath( parent10.getImage().getImageId(), parent10.getImage().getImagePath()); } else { img = null; } color = parent10.getColor(); if (color != null) color.getValue(); parentVoLookup10.setParent( new ims.core.vo.lookups.LateralityLRB( parent10.getId(), parent10.getText(), parent10.isActive(), null, img, color)); parentVoLookup10 = parentVoLookup10.getParent(); parent10 = parent10.getParent(); } valueObject.setDiagLaterality(voLookup10); } // SiteText valueObject.setSiteText(domainObject.getSiteText()); // AuthoringInfo valueObject.setAuthoringInfo( ims.core.vo.domain.AuthoringInformationVoAssembler.create( map, domainObject.getAuthoringInfo())); // IncludeDiagnosisInDiscReports valueObject.setIncludeDiagnosisInDiscReports( ims.core.vo.domain.IncludeDiagnosisInDischargeReportVoAssembler .createIncludeDiagnosisInDischargeReportVoCollectionFromIncludeDiagnosisInDischargeReport( map, domainObject.getIncludeDiagnosisInDiscReports())); // isPrevRelevantDiagnosis valueObject.setIsPrevRelevantDiagnosis(domainObject.isIsPrevRelevantDiagnosis()); // SysInfo // set system information valueObject.setSysInfo( ims.vo.domain.SystemInformationAssembler.create(domainObject.getSystemInformation())); // DateOnset java.util.Date DateOnset = domainObject.getDateOnset(); if (null != DateOnset) { valueObject.setDateOnset(new ims.framework.utils.Date(DateOnset)); } // ClinicalContact if (domainObject.getClinicalContact() != null) { if (domainObject.getClinicalContact() instanceof HibernateProxy) // If the proxy is set, there is no need to lazy load, the proxy knows the // id already. { HibernateProxy p = (HibernateProxy) domainObject.getClinicalContact(); int id = Integer.parseInt(p.getHibernateLazyInitializer().getIdentifier().toString()); valueObject.setClinicalContact(new ims.core.admin.vo.ClinicalContactRefVo(id, -1)); } else { valueObject.setClinicalContact( new ims.core.admin.vo.ClinicalContactRefVo( domainObject.getClinicalContact().getId(), domainObject.getClinicalContact().getVersion())); } } // PrimaryForCareSpells valueObject.setPrimaryForCareSpells( ims.core.vo.domain.CSPrimaryDiagnosisVoAssembler .createCSPrimaryDiagnosisVoCollectionFromCsPrimaryDiagnosis( map, domainObject.getPrimaryForCareSpells())); // CoMorbidityForEpisodeOfCares valueObject.setCoMorbidityForEpisodeOfCares( ims.core.vo.domain.EpisodeOfCareCoMorbidityVoAssembler .createEpisodeOfCareCoMorbidityVoCollectionFromEpisodeOfCareCoMorbidity( map, domainObject.getCoMorbidityForEpisodeOfCares())); // EpisodeOfCare if (domainObject.getEpisodeOfCare() != null) { if (domainObject.getEpisodeOfCare() instanceof HibernateProxy) // If the proxy is set, there is no need to lazy load, the proxy knows the // id already. { HibernateProxy p = (HibernateProxy) domainObject.getEpisodeOfCare(); int id = Integer.parseInt(p.getHibernateLazyInitializer().getIdentifier().toString()); valueObject.setEpisodeOfCare(new ims.core.admin.vo.EpisodeOfCareRefVo(id, -1)); } else { valueObject.setEpisodeOfCare( new ims.core.admin.vo.EpisodeOfCareRefVo( domainObject.getEpisodeOfCare().getId(), domainObject.getEpisodeOfCare().getVersion())); } } // diagnosedOnAdmission valueObject.setDiagnosedOnAdmission(domainObject.isDiagnosedOnAdmission()); return valueObject; }