@Override
public void create(Collection errors) throws OntologyLoadException {
project = Project.createNewProject(factory, errors);
owlModel = (JenaOWLModel) project.getKnowledgeBase();
if (ontologyName == null) {
ontologyName = FactoryUtils.generateOntologyURIBase();
}
try {
FactoryUtils.addOntologyToTripleStore(
owlModel, owlModel.getTripleStoreModel().getActiveTripleStore(), ontologyName);
} catch (AlreadyImportedException e) {
throw new RuntimeException("This shouldn't happen", e);
}
addViewSettings(project.getSources());
}
@SuppressWarnings("unchecked")
public JenaOWLModel reload(JenaOWLModel owlModel) throws Exception {
Collection errors = new ArrayList();
OntModel ontModel = owlModel.getOntModel();
ByteArrayOutputStream stream = new ByteArrayOutputStream();
Jena.dumpRDF(ontModel, stream);
String str = stream.toString();
StringReader reader = new StringReader(str);
if (log.isLoggable(Level.FINE)) {
log.fine("Saved ontology to string");
log.fine(str);
log.fine("reloading...");
}
OwlProjectFromReaderCreator creator = new OwlProjectFromReaderCreator();
creator.setReader(reader);
creator.create(errors);
return creator.getOwlModel();
}
ProtegeSettingsPanel(final JenaOWLModel owlModel) {
this.owlModel = owlModel;
importMetaCBox = new JCheckBox("Import Protege metadata ontology");
importMetaCBox.addActionListener(
new ActionListener() {
public void actionPerformed(ActionEvent e) {
if (importMetaCBox.isSelected()) {
enableProtegeOntology();
} else {
disableProtegeOntology();
}
}
});
if (owlModel.isProtegeMetaOntologyImported()) {
importMetaCBox.setSelected(true);
if (!isMetadataOntologyImportedDirectly(OWLUtil.getActiveOntology(owlModel))) {
importMetaCBox.setEnabled(false);
}
}
userDatatypesCBox = new JCheckBox("Support user-defined XML Schema datatypes (numeric ranges)");
userDatatypesCBox.addActionListener(
new ActionListener() {
public void actionPerformed(ActionEvent e) {
setUserDefinedDatatypesSupported(owlModel, userDatatypesCBox.isSelected());
ProtegeUI.reloadUI(owlModel);
}
});
userDatatypesCBox.setEnabled(importMetaCBox.isSelected());
userDatatypesCBox.setSelected(ProtegeSettingsPanel.isUserDefinedDatatypesSupported(owlModel));
setBorder(BorderFactory.createTitledBorder("Protege Features"));
setLayout(new GridLayout(2, 1));
add(importMetaCBox);
add(userDatatypesCBox);
}
public JenaOWLModel reloadWithJenaLoader(JenaOWLModel owlModel) throws Exception {
ByteArrayOutputStream stream = new ByteArrayOutputStream();
Jena.dumpRDF(owlModel.getOntModel(), stream);
String str = stream.toString();
return ProtegeOWL.createJenaOWLModelFromReader(new StringReader(str));
}