/**
* Creates a list of {@link NetworkLink}s, one for each {@link ddf.catalog.source.Source}
* including the local catalog.
*
* @param uriInfo - injected resource provding the URI.
* @return - {@link Kml} containing a folder of {@link NetworkLink}s.
*/
@GET
@Path(FORWARD_SLASH + "sources")
@Produces(KML_MIME_TYPE)
public Kml getAvailableSources(@Context UriInfo uriInfo) {
try {
SourceInfoResponse response = framework.getSourceInfo(new SourceInfoRequestEnterprise(false));
Kml kml = KmlFactory.createKml();
Folder folder = kml.createAndSetFolder();
folder.setOpen(true);
for (SourceDescriptor descriptor : response.getSourceInfo()) {
UriBuilder builder = UriBuilder.fromUri(uriInfo.getBaseUri());
builder =
generateEndpointUrl(
servicesContextRoot
+ FORWARD_SLASH
+ CATALOG_URL_PATH
+ FORWARD_SLASH
+ OPENSEARCH_URL_PATH,
builder);
builder = builder.queryParam(SOURCE_PARAM, descriptor.getSourceId());
builder = builder.queryParam(OPENSEARCH_SORT_KEY, OPENSEARCH_DEFAULT_SORT);
builder = builder.queryParam(OPENSEARCH_FORMAT_KEY, KML_TRANSFORM_PARAM);
NetworkLink networkLink =
generateViewBasedNetworkLink(builder.build().toURL(), descriptor.getSourceId());
folder.getFeature().add(networkLink);
}
return kml;
} catch (SourceUnavailableException e) {
throw new WebApplicationException(e, Status.INTERNAL_SERVER_ERROR);
} catch (UnknownHostException e) {
throw new WebApplicationException(e, Status.INTERNAL_SERVER_ERROR);
} catch (MalformedURLException e) {
throw new WebApplicationException(e, Status.INTERNAL_SERVER_ERROR);
} catch (IllegalArgumentException e) {
throw new WebApplicationException(e, Status.INTERNAL_SERVER_ERROR);
} catch (UriBuilderException e) {
throw new WebApplicationException(e, Status.INTERNAL_SERVER_ERROR);
}
}
private void execute(String sourcePath, String targetPath, String species, String language)
throws NullPointerException {
if (language.equals("espanol") || language.equals("español")) {
System.out.println("bienvenido \n seleccione la opcion que desee");
System.out.println("1. crear el archivo properties");
System.out.println("2. convierte archivo .shp a kml, protected areas");
System.out.println(
"3. convierte archivo .csv a kml; puntos y poligonos - ocurrencias y chull, chull-buff");
System.out.println("4. convierte archivo .asc a png, variables bioclimaticas");
System.out.println("5. convierte archivo .asc a png, distribucion de especies");
System.out.println("6. realiza todos los procesos anteriores");
System.out.println(
"para mas info consulta en la wiki del proyecto http://code.google.com/p/iabin-threats/wiki/HowToBuildITAMaps");
}
if (language.equals("english")) {
System.out.println("welcome \n select the option: ");
System.out.println("1. create default properties file");
System.out.println("2. convert file .shp to kml, protected areas");
System.out.println(
"3. convert file .csv to kml; points and polygons - ocurrences and chull, chull-buff");
System.out.println("4. convert file .asc to png, variables bioclimaticas");
System.out.println("5. convert file .asc to png, species distribution");
System.out.println("6. performs all the previous tasks");
System.out.println(
"for more info visit the project's wiki page at http://code.google.com/p/iabin-threats/wiki/HowToBuildITAMaps");
}
String option;
String horaEmpieza = this.getDateTime();
if (language.equals("english")) System.out.println("started at : " + horaEmpieza);
if (language.equals("espanol") || language.equals("español"))
System.out.println("empieza a las : " + horaEmpieza);
if (language.equals("english")) System.out.print("please select an option :");
if (language.equals("espanol") || language.equals("español"))
System.out.print("por favor seleccione una opcion :");
Scanner in = new Scanner(System.in);
option = in.nextLine();
int opt = Integer.parseInt(option);
if (opt == 1 || opt == 6) {
if (language.equals("english")) System.out.println("you selected option :" + option);
if (language.equals("espanol") || language.equals("español"))
System.out.println("usted escogio la opcion :" + option);
// esta sección crea el archivo properties con la configuración por defecto.
PropertiesGenerator propGen =
new PropertiesGenerator(targetPath + "default-iabin.properties");
try {
propGen.write();
} catch (IOException e1) {
// TODO Auto-generated catch block
e1.printStackTrace();
}
} // cierra el case1
// protected areas shape to kml
if (opt == 2 || opt == 6) {
if (language.equals("english")) System.out.println("you selected option :" + option);
if (language.equals("espanol") || language.equals("español"))
System.out.println("usted escogio la opcion :" + option);
String[] shapesID = PropertiesManager.getInstance().getPropertiesAsStringArray("shapes");
for (String shapeID : shapesID) {
System.out.println(shapeID);
String group = PropertiesManager.getInstance().getPropertiesAsString(shapeID + ".group");
String pathGroup = PropertiesManager.getInstance().getPropertiesAsString(group + ".path");
String fileName =
PropertiesManager.getInstance().getPropertiesAsString(shapeID + ".shapefile");
int[] columnIndexes =
PropertiesManager.getInstance()
.getPropertiesAsIntArray(shapeID + ".shape.column.indexes");
String[] columnName =
PropertiesManager.getInstance()
.getPropertiesAsStringArray(shapeID + ".shape.column.names");
String sourceFile = sourcePath + pathGroup + fileName;
String targetFile = targetPath + pathGroup + shapeID;
SortedMap<Integer, String> atributos = new TreeMap<Integer, String>();
for (int i = 0; i < columnIndexes.length; i++) {
atributos.put(columnIndexes[i], columnName[i]);
}
File file = new File(sourceFile); // loads the shape file to read
System.out.println("folder of shape file: " + sourceFile);
System.out.println("file: " + file);
shp = new Shapefile(file);
SimpleFeature sf = null;
FeatureIterator<SimpleFeature> fi = shp.getFeatures();
final Kml kml2 = new Kml();
Folder folder = kml2.createAndSetFolder();
String ruta = targetFile + File.separator + "total-info.kml";
System.out.println("ruta: " + ruta);
DecimalFormat formatter = new DecimalFormat("####.####");
while (fi.hasNext()) { // && count-- > 0) {
sf = fi.next();
Set<Integer> keySet = atributos.keySet();
String descripcion =
"<div><h2 align=\"center\"><span>Information Protected Area</span></h2></div><h5><table bgcolor=\"#BCD56C\" border=\"1\" align=\"center\">";
for (Integer i :
keySet) { // se crean los titulos de la tabla de la informacion del poligono
descripcion += "<tr align=\"left\"><th>" + atributos.get(i) + "</th>";
String contenido = (String) sf.getAttribute(i).toString();
if (isValidDouble(contenido)) {
contenido = formatter.format(Double.parseDouble(contenido));
}
descripcion += "<td>" + contenido + "</td>";
}
// descripcion += "</tr><tr>";
descripcion += "</tr></table></h5>";
Placemark placemark = KmlFactory.createPlacemark();
String estilo = PropertiesManager.getInstance().getPropertiesAsString("style.url");
// se recorre la lista generando las coordenadas y agregando al folder
placemark = folder.createAndAddPlacemark(); // se crea el placemark y se añade al folder
placemark.withName(atributos.get(1)).withDescription(descripcion).withStyleUrl(estilo);
Point punto = Shapefile.getPointForMarker(sf);
// se crean las coordenadas y se registran al placemark
placemark.createAndSetPoint().addToCoordinates(punto.getX(), punto.getY());
} // fin while
kml2.setFeature(folder); // se registra el folder al kml
File dir = new File(targetFile);
dir.mkdirs();
// kml.marshal();//se imprime kml en consola
try {
kml2.marshal(new File(ruta));
} catch (FileNotFoundException e) {
// TODO Auto-generated catch block
e.printStackTrace();
} // se guarda kml en archivo
}
} // fin case 2
// **********************************************************************************************************
// Esta seccion se encarga de recorrer la carpeta data y cargar los
// archivos csv para convertir a kml
// puntos y poligonos - ocurrencias y chull, chull-buff
if (opt == 3 || opt == 6) {
if (language.equals("english")) System.out.println("you selected option :" + option);
if (language.equals("espanol") || language.equals("español"))
System.out.println("usted escogio la opcion :" + option);
// se debe agregar properties
String estilo = PropertiesManager.getInstance().getPropertiesAsString("style.url");
String estilo1 = PropertiesManager.getInstance().getPropertiesAsString("style1.url");
File folder = new File(sourcePath + species);
// *************************************************************************************
File[] listOfFiles = folder.listFiles();
int contador = 100;
for (File s : listOfFiles) {
if (s.isDirectory()) {
String ruta =
folder.getPath() + File.separator + s.getName() + File.separator + s.getName();
if (contador % 100 == 0) {
System.out.println("File " + ruta);
System.gc();
}
contador++;
CsvFile file1 = new CsvFile(ruta + ".csv");
lista = file1.getLista();
CsvFile chull = new CsvFile(ruta + "-chull.csv");
listaChull = chull.getLista();
CsvFile chullbuff = new CsvFile(ruta + "-chull-buff.csv");
listaChullBuff = chullbuff.getLista();
Csv2Point point = new Csv2Point(lista);
try {
point.createKML(
targetPath + species + s.getName() + File.separator,
s.getName(),
estilo); // cambiar a properties file
} catch (FileNotFoundException e) {
e.printStackTrace();
}
Csv2Polygon pol = new Csv2Polygon(listaChull, listaChullBuff, estilo, estilo1);
try {
pol.createKMLchull(
targetPath + species + s.getName() + File.separator,
s.getName(),
estilo); // crea kml chull
pol.createKMLchullbuff(
targetPath + species + s.getName() + File.separator,
s.getName(),
estilo1); // crea kml chull buff
} catch (FileNotFoundException e) {
e.printStackTrace();
}
}
}
} // fin case3
// bioclim variables
if (opt == 4 || opt == 6) {
if (language.equals("english")) System.out.println("you selected option :" + option);
if (language.equals("espanol") || language.equals("español"))
System.out.println("usted escogio la opcion :" + option);
try {
TileCutter.execute(propertiesFile);
} catch (IOException e) {
System.out.println("file not found");
e.getMessage();
e.printStackTrace();
}
} // fin case 4
// se crean las imagenes de distribucion de especies a partir de los rasters .asc
if (opt == 5 || opt == 6) {
if (language.equals("english")) System.out.println("you selected option :" + option);
if (language.equals("espanol") || language.equals("español"))
System.out.println("usted escogio la opcion :" + option);
if (opt == 5) {
if (language.equals("english"))
System.out.println("Do you want to run the script for all species? y/n :");
if (language.equals("espanol") || language.equals("español"))
System.out.println("Desea correr el algoritmo para todas las especies? s/n" + option);
option = in.nextLine();
if (option.equalsIgnoreCase("n")) {
if (language.equals("english"))
System.out.println(
"Please write the minimum and maximum species directory separated by (-), format: 78465-98750543:");
if (language.equals("espanol") || language.equals("español"))
System.out.println(
"Por favor, indique el codigo de especie minimo y maximo, formato: 78465-98750543");
option = in.nextLine();
String[] minMax = option.split("-");
if (minMax.length == 2) {
String min = minMax[0];
String max = minMax[1];
try {
TileCutter.createSpeciesDistributionImages(propertiesFile, min, max);
} catch (IOException e) {
System.out.println("file not found");
e.getMessage();
e.printStackTrace();
}
} else {
if (language.equals("english")) System.out.println("Invalid format!");
if (language.equals("espanol") || language.equals("español"))
System.out.println("Formato incorrecto!");
}
} else {
try {
TileCutter.createSpeciesDistributionImages(propertiesFile, null, null);
} catch (IOException e) {
System.out.println("file not found");
e.getMessage();
e.printStackTrace();
}
}
} else {
try {
TileCutter.createSpeciesDistributionImages(propertiesFile, null, null);
} catch (NumberFormatException e) {
System.out.println("format error");
e.getMessage();
e.printStackTrace();
} catch (IOException e) {
System.out.println("file not found");
e.getMessage();
e.printStackTrace();
}
}
} // fin case 5
String horaTermina = this.getDateTime();
if (language.equals("espanol") || language.equals("español"))
System.out.println(
"empezo a las : " + horaEmpieza + "\r\n" + " finalizo a las : " + horaTermina);
if (language.equals("english"))
System.out.println("started at : " + horaEmpieza + "\r\n" + " ended at : " + horaTermina);
} // fin switch