private String deIdentifyParticipantName(String report, Map<String, Object> contextMap) {
Long visitId = (Long) contextMap.get("visitId");
Visit visit = daoFactory.getVisitsDao().getById(visitId);
Participant participant = visit.getRegistration().getParticipant();
StringBuilder regex = new StringBuilder();
String lastName = participant.getLastName();
if (StringUtils.isNotBlank(lastName)) {
regex.append(" ").append(lastName).append(" ");
}
String firstName = participant.getFirstName();
if (StringUtils.isNotBlank(firstName)) {
addOr(regex);
regex.append(" ").append(firstName).append(" ");
}
if (regex.length() > 0) {
regex.insert(0, "(?i)\\b(");
regex.append(")\\b");
report = report.replaceAll(regex.toString(), REPLACEMENT_STRING);
}
return report;
}
@SuppressWarnings("unchecked")
@Override
public ResponseEvent<Map<String, Object>> importObject(
RequestEvent<ImportObjectDetail<Map<String, Object>>> req) {
try {
ImportObjectDetail<Map<String, Object>> importDetail = req.getPayload();
Map<String, Object> params = importDetail.getParams();
Map<String, Object> extnObj = importDetail.getObject();
String recordId = (String) extnObj.get("recordId");
if (importDetail.isCreate() && StringUtils.isNotBlank(recordId)) {
return ResponseEvent.userError(FormErrorCode.REC_ID_SPECIFIED_FOR_CREATE);
} else if (!importDetail.isCreate() && StringUtils.isBlank(recordId)) {
return ResponseEvent.userError(FormErrorCode.REC_ID_REQUIRED);
}
String entityType = (String) params.get("entityType");
Long objectId = null;
CollectionProtocol cp = null;
if (entityType.equals("Participant")) {
String ppid = (String) extnObj.get("ppid");
String cpShortTitle = (String) extnObj.get("cpShortTitle");
CollectionProtocolRegistration cpr =
daoFactory.getCprDao().getCprByCpShortTitleAndPpid(cpShortTitle, ppid);
if (cpr == null) {
return ResponseEvent.userError(CprErrorCode.NOT_FOUND);
}
objectId = cpr.getId();
cp = cpr.getCollectionProtocol();
} else if (entityType.equals("SpecimenCollectionGroup")) {
String visitName = (String) extnObj.get("visitName");
Visit visit = daoFactory.getVisitsDao().getByName(visitName);
if (visit == null) {
return ResponseEvent.userError(VisitErrorCode.NOT_FOUND);
}
objectId = visit.getId();
cp = visit.getCollectionProtocol();
} else if (entityType.equals("Specimen") || entityType.equals("SpecimenEvent")) {
String label = (String) extnObj.get("specimenLabel");
Specimen specimen = daoFactory.getSpecimenDao().getByLabel(label);
if (specimen == null) {
return ResponseEvent.userError(SpecimenErrorCode.NOT_FOUND, label);
}
objectId = specimen.getId();
cp = specimen.getCollectionProtocol();
}
String formName = (String) params.get("formName");
Container form = Container.getContainer(formName);
if (form == null) {
return ResponseEvent.userError(FormErrorCode.NOT_FOUND);
}
Long formCtxId = formDao.getFormCtxtId(form.getId(), entityType, cp.getId());
if (formCtxId == null) {
return ResponseEvent.userError(
FormErrorCode.NO_ASSOCIATION, cp.getShortTitle(), form.getCaption());
}
Map<String, Object> appData = new HashMap<String, Object>();
appData.put("formCtxtId", formCtxId);
appData.put("objectId", objectId);
Map<String, Object> formValueMap = (Map<String, Object>) extnObj.get("formValueMap");
formValueMap.put("appData", appData);
if (StringUtils.isNotBlank(recordId)) {
formValueMap.put("id", Long.parseLong(recordId));
}
FormData formData = FormData.getFormData(form, formValueMap, true, null);
FormDataDetail formDataDetail = new FormDataDetail();
formDataDetail.setFormId(form.getId());
formDataDetail.setRecordId(formData.getRecordId());
formDataDetail.setFormData(formData);
ResponseEvent<FormDataDetail> resp =
formSvc.saveFormData(new RequestEvent<FormDataDetail>(formDataDetail));
resp.throwErrorIfUnsuccessful();
return ResponseEvent.response(resp.getPayload().getFormData().getFieldNameValueMap(true));
} catch (OpenSpecimenException ose) {
return ResponseEvent.error(ose);
} catch (Exception e) {
return ResponseEvent.serverError(e);
}
}
